| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smal_0308 |
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| Symbol | |
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| ID | 6478104 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Stenotrophomonas maltophilia R551-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011071 |
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| Strand | - |
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| Start bp | 373136 |
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| End bp | 376393 |
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| Gene Length | 3258 bp |
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| Protein Length | 1085 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 642729453 |
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| Product | bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase |
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| Protein accession | YP_002026696 |
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| Protein GI | 194364086 |
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| COG category | [C] Energy production and conversion
[E] Amino acid transport and metabolism |
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| COG ID | [COG0506] Proline dehydrogenase
[COG4230] Delta 1-pyrroline-5-carboxylate dehydrogenase |
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| TIGRFAM ID | [TIGR01238] delta-1-pyrroline-5-carboxylate dehydrogenase (PutA C-terminal domain) |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.048295 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTAAAA TCGCCAAGTT TTCCATTGGC CGGACCGGCA TGAACGCACC CTTCTCCTCC
CCTGCCGCCA GCGACGCTTC GCGTCCCGGC GCGCTGCTGT CGCCGGAACT GCCGGCGTCC
CCCAACCCGT TCCGCCAGGC CATCACCGAT GGCTGGTTGA AGGACGAGGC CAGCCACGTG
CGTGAACTGC TGGCACAGGC GCGCCTTCCC GCCGAGGAAC AGGCCAAGGT GCAGGCGCTG
GCCGCCGACC TGGTCGGCCG CGTGCGCGTG CGCGCCAAGG ACCAGGGCGC AATCGAAGCC
TTCATGCGCC AGTACGACCT GGGCAGCGAG GAGGGCGTGC TGCTGATGTG CGTGGCCGAA
GCGCTGCTGC GCATTCCGGA CCAGGACACC GCCGACAAGC TGATCCGCGA CAAGCTGGCC
GATGCCGACT GGGAAAAGCA CCTGGGCGGC AGCGACTCGG TGCTGGTCAA CGCCTCCACC
TGGGGCCTGA TGCTGACCGG CAAGCTGGTG CAGATGAACG ACGCAACCCG CGCCGATGCG
CCCAGCGCGT TCAAGCGCCT GGTCGGCCGC GTCGGTGAGC CGGTGGTGCG CCTGGCCGTG
CGCCAGGCGA TGAAGATCAT GGGCCACCAG TTCGTCATGG GCCGCACCAT CAGCGAAGCG
CTGTCGCGCT CGCACAAGGG CGACAACGCC AGCTACCGCT ACTCGTTCGA CATGCTGGGC
GAAGGCGCGC TGACCATGAA GGACGCGCTG CGCTACCTGG AAGACTACCG ACGTGCGATC
CACGCCATCG GTGGCGATCA CAAGGCACGC GGTGGCCGCC CGGACGGCGA CGTCAACAAC
GCCCCGGGCA TCTCGATCAA GCTGTCGGCG CTGTACCCGC GCTACGAGCA TGCCAAGCGC
GAGCGCGTGC TGAAGGACCT GGTGCCGGGC GTGCTGGAAC TGGCACAGCT GGCCAGGAGC
TACGGCATCG GCTGCACCGT CGACGCCGAA GAGTCCGACC GCCTGGAACT GTCGCTGGAC
ATCATCGAGC AGGTGTTCTC CGATGCGTCG CTGGCCGGCT GGGATGGCTT CGGTGTGGTC
GTGCAGGCCT ACCAGAAGCG TACGCCGTAC ACGATCGACC ACCTGGCCGA CATGGCGCGC
CGCGCCGGTC GCCGGCTGCA GGTGCGCCTG GTCAAGGGCG CCTACTGGGA CGCCGAGATC
AAGCGCGCGC AGATCGAAGG CTATCCGGGC TACCCGGTGT TCACCCGCAA GCAGAACACC
GATGTCTCCT ACCTGGCCTG CGCCAAGCGC CTGTTCACCC ATGCCGACGC GATCTACCCG
ATGTTCGCCA CGCACAACGC ACACACCATC GCGGCCGTGC GCAGCATCGC CAATGGCGGC
GTGTACGAGC ACCAGAAGCT GCACGGCATG GGCGACGACC TGTACGCCGA AGTGGTGCCG
GCCGACCGCT TGAACCTGCC GTGCCGCGTG TACGCGCCGG TGGGTTCGCA TGAAGACCTG
CTGCCGTACC TGGTGCGCCG CCTGCTGGAA AACGGCGCCA ACTCCAGCTT CGTCAACCGC
ATCACCGACG AGCGCGTACC GATCGCCGAC CTGATCCGCG ATCCGGTCGA GATGGTTGCT
TCGTTCGAAT CGATTCCGCA TCCCAAGATC CCGCTGCCGG TTGACCTGCT GCGCAGCCAG
AACCACGACA GGAAGAACTC CATGGGCGCC AACCTCGCCA ACGACAACGA ACTGCGCGCC
CTGGCCGAGC AGCTCAACAC CGCCGTCAAG CCGTGGTCGG CCGCGCCGCT GGTGCCGGGT
GCCAACCCAG CCGGCGCCAC GCAGCCGGTG ACCAATCCGG CCGACACCCG CGAAGTGGTC
GGCCAGTGGC AGGCCGCCGA TGCCGCCACC GTGCAGAAGG CACTGGCCAA TGCCGTGGCC
GCGCAGCCGG CCTGGAACCG CACCCCGGCC GCCAGCCGCG CCGCCATCCT CGAGCACGCC
GCCGACCAGC TGGAAGCGCG CATGCCGGAG TTCATGGCAC TGTGCGTGAA GGAAGCCGGC
AAGAGCCTGC CCGACGGCAT CGCCGAAGTG CGCGAAGCGG TGGACTTCCT GCGTTACTAC
GCCAAGCAGG CACGCGAGCA GTTCAGCCAC GCCGAGAAGC TGCCGAGCCC GACCGGCGAA
TCCAACGAGC TGCAGCTGCA TGGCCGCGGC GTGTTCGTCT GCATCAGCCC GTGGAACTTC
CCGCTGGCGA TCTTCCTCGG CCAGGTGGCC GCTGCACTGG CCGCCGGCAA CAGCGTCATC
GCCAAGCCAG CCGAGCAGAC CAATCTGATC GGCTACTACG CGGTGAAGCT GCTGCATGAC
GCCGGCGTGC CGGCCGACGT GGTGCAGTAC CTGCCTGGCG ACGGCGCGAC CGTCGGTGCC
GCGCTGACCG CCGACCCACG CGTGGCTGGC GTGGCCTTCA CCGGCTCCAC CGACACCGCC
CGTGCGATCA ACCGCGCGAT GGCTGCACGT GACGCCGCCA TCGGTGTGCT GATTGCCGAG
ACCGGTGGCC AGAATGCCTT CATCGCCGAC TCCTCGGCGC TGCCGGAACA GCTGGTCAAG
GATGCGATCG GCTCGGCCTT CACCTCGGCC GGCCAGCGCT GCTCGGCTGC GCGCGTGCTG
TTCGTGCAGG ACGACATCGC CGACAAGGTG ATGACCATGC TGGCCGGTGC GATGAAGGAA
CTGAAGGTCG GCAATCCCGG CCTGCTGTCC ACCGACGTCG GCCCGGTGAT CGACGCCGAC
GCGCTGAAGA TCCTGCAGGA CCACGCCGAA CGCATGGACC GCGAAGCGCG CCTGATTGCT
GCCGCCGAGC TGTCTGTCGA AGCAGCCAAC GGCACCTTCT TCGCACCGCG TGCGTACGAA
CTGAAGGACC TGGGCCAGCT GCAGAAGGAA GTGTTCGGTC CGGTCCTGCA CGTGATCCGC
TGGAAGGGCG ACCAGCTCGA CGCGGTGATC GACCAGATCA ACGCCACCGG CTACGGCCTG
ACCCTGGGCG TGCATTCGCG CATTGACGAG ACCGTCGACC GCATCAGCAA CGGCGTCCAC
GTCGGCAACG TCTACGTCAA CCGCAACCAG ATCGGTGCGG TGGTCGGCGT GCAGCCGTTC
GGCGGCCAGG GCCTGTCCGG CACCGGCCCG AAGGCCGGCG GCCCGCACTA CCTGCTGCGC
TTCGCCACTG AAAAGACGGT AACGGTGAAC ACCACCGCTG CCGGCGGCAA CGCCTCGCTG
CTGACCCTGG GCGACTGA
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| Protein sequence | MIKIAKFSIG RTGMNAPFSS PAASDASRPG ALLSPELPAS PNPFRQAITD GWLKDEASHV
RELLAQARLP AEEQAKVQAL AADLVGRVRV RAKDQGAIEA FMRQYDLGSE EGVLLMCVAE
ALLRIPDQDT ADKLIRDKLA DADWEKHLGG SDSVLVNAST WGLMLTGKLV QMNDATRADA
PSAFKRLVGR VGEPVVRLAV RQAMKIMGHQ FVMGRTISEA LSRSHKGDNA SYRYSFDMLG
EGALTMKDAL RYLEDYRRAI HAIGGDHKAR GGRPDGDVNN APGISIKLSA LYPRYEHAKR
ERVLKDLVPG VLELAQLARS YGIGCTVDAE ESDRLELSLD IIEQVFSDAS LAGWDGFGVV
VQAYQKRTPY TIDHLADMAR RAGRRLQVRL VKGAYWDAEI KRAQIEGYPG YPVFTRKQNT
DVSYLACAKR LFTHADAIYP MFATHNAHTI AAVRSIANGG VYEHQKLHGM GDDLYAEVVP
ADRLNLPCRV YAPVGSHEDL LPYLVRRLLE NGANSSFVNR ITDERVPIAD LIRDPVEMVA
SFESIPHPKI PLPVDLLRSQ NHDRKNSMGA NLANDNELRA LAEQLNTAVK PWSAAPLVPG
ANPAGATQPV TNPADTREVV GQWQAADAAT VQKALANAVA AQPAWNRTPA ASRAAILEHA
ADQLEARMPE FMALCVKEAG KSLPDGIAEV REAVDFLRYY AKQAREQFSH AEKLPSPTGE
SNELQLHGRG VFVCISPWNF PLAIFLGQVA AALAAGNSVI AKPAEQTNLI GYYAVKLLHD
AGVPADVVQY LPGDGATVGA ALTADPRVAG VAFTGSTDTA RAINRAMAAR DAAIGVLIAE
TGGQNAFIAD SSALPEQLVK DAIGSAFTSA GQRCSAARVL FVQDDIADKV MTMLAGAMKE
LKVGNPGLLS TDVGPVIDAD ALKILQDHAE RMDREARLIA AAELSVEAAN GTFFAPRAYE
LKDLGQLQKE VFGPVLHVIR WKGDQLDAVI DQINATGYGL TLGVHSRIDE TVDRISNGVH
VGNVYVNRNQ IGAVVGVQPF GGQGLSGTGP KAGGPHYLLR FATEKTVTVN TTAAGGNASL
LTLGD
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