Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smal_0278 |
Symbol | |
ID | 6478063 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stenotrophomonas maltophilia R551-3 |
Kingdom | Bacteria |
Replicon accession | NC_011071 |
Strand | + |
Start bp | 325601 |
End bp | 326353 |
Gene Length | 753 bp |
Protein Length | 250 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 642729412 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_002026666 |
Protein GI | 194364056 |
COG category | [R] General function prediction only |
COG ID | [COG4221] Short-chain alcohol dehydrogenase of unknown specificity |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.241835 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCCGCA CTGTCCTGAT TACCGGCGCC ACTTCCGGCT TCGGCGCCGC TGCCGTCCAC CGCTTCGCCC AGGCGGGCTG GAAGGTGATC GCCACCGGCC GCCGCGGCGA ACGCCTGCAG CCGCTGGTCG AACGCTATGG CAAGGACGTG GTGCATGCCG CGGTCTTCGA CATCCGCGAC CCGGTGGCGA TGGAAGCGGC GCTGCTGGCG CTGCCGCCGG CGTTCGGTGA GATCGACCTG CTGGTCAACA ACGCTGGCCT GGCACAGGGC ACCGCGCCGG CACAGAGCGC AAAGCTGTCC GACTGGACCA CGATGATCGA CACCAACATC ACCGCACTGG TGACCCTGAC CCACCGCCTG CTGCCGCAAC TGGTCGAGCG CAAGGGCGCG ATCATCAACA TTTCCTCGGT GGCCGGCGTC TACCCCTACC CGGGCGGCAA CGCCTACGGT GGCACCAAGG CCTTCGTCAG CCAGTTCTCG CTGGGCCTGC GCTCGGATCT GCACGGTACC GGCGTGCGCG TGACCACGAT CGAGCCGGGC ATGGCCGAAA CCGAGTTCAC CGTGGTGCGA ACCCATGGCG ACCAGGCTGC GTCGGACAAG CTCTATACCG GCGCCAACCC GATGACCGCC GAAGACATCG CCGAACAGAT CTTCTGGGTG GCCACGCTGC CGCCGCACCT CAACATCAAC CGCCTGGAGC TGATGCCGGT CAGCCAGTCG TTCGCAGGTT TCCAGGTCGC CCGCGAAGGC TGA
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Protein sequence | MTRTVLITGA TSGFGAAAVH RFAQAGWKVI ATGRRGERLQ PLVERYGKDV VHAAVFDIRD PVAMEAALLA LPPAFGEIDL LVNNAGLAQG TAPAQSAKLS DWTTMIDTNI TALVTLTHRL LPQLVERKGA IINISSVAGV YPYPGGNAYG GTKAFVSQFS LGLRSDLHGT GVRVTTIEPG MAETEFTVVR THGDQAASDK LYTGANPMTA EDIAEQIFWV ATLPPHLNIN RLELMPVSQS FAGFQVAREG
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