Gene Smal_0278 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_0278 
Symbol 
ID6478063 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp325601 
End bp326353 
Gene Length753 bp 
Protein Length250 aa 
Translation table11 
GC content67% 
IMG OID642729412 
Productshort-chain dehydrogenase/reductase SDR 
Protein accessionYP_002026666 
Protein GI194364056 
COG category[R] General function prediction only 
COG ID[COG4221] Short-chain alcohol dehydrogenase of unknown specificity 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.241835 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCGCA CTGTCCTGAT TACCGGCGCC ACTTCCGGCT TCGGCGCCGC TGCCGTCCAC 
CGCTTCGCCC AGGCGGGCTG GAAGGTGATC GCCACCGGCC GCCGCGGCGA ACGCCTGCAG
CCGCTGGTCG AACGCTATGG CAAGGACGTG GTGCATGCCG CGGTCTTCGA CATCCGCGAC
CCGGTGGCGA TGGAAGCGGC GCTGCTGGCG CTGCCGCCGG CGTTCGGTGA GATCGACCTG
CTGGTCAACA ACGCTGGCCT GGCACAGGGC ACCGCGCCGG CACAGAGCGC AAAGCTGTCC
GACTGGACCA CGATGATCGA CACCAACATC ACCGCACTGG TGACCCTGAC CCACCGCCTG
CTGCCGCAAC TGGTCGAGCG CAAGGGCGCG ATCATCAACA TTTCCTCGGT GGCCGGCGTC
TACCCCTACC CGGGCGGCAA CGCCTACGGT GGCACCAAGG CCTTCGTCAG CCAGTTCTCG
CTGGGCCTGC GCTCGGATCT GCACGGTACC GGCGTGCGCG TGACCACGAT CGAGCCGGGC
ATGGCCGAAA CCGAGTTCAC CGTGGTGCGA ACCCATGGCG ACCAGGCTGC GTCGGACAAG
CTCTATACCG GCGCCAACCC GATGACCGCC GAAGACATCG CCGAACAGAT CTTCTGGGTG
GCCACGCTGC CGCCGCACCT CAACATCAAC CGCCTGGAGC TGATGCCGGT CAGCCAGTCG
TTCGCAGGTT TCCAGGTCGC CCGCGAAGGC TGA
 
Protein sequence
MTRTVLITGA TSGFGAAAVH RFAQAGWKVI ATGRRGERLQ PLVERYGKDV VHAAVFDIRD 
PVAMEAALLA LPPAFGEIDL LVNNAGLAQG TAPAQSAKLS DWTTMIDTNI TALVTLTHRL
LPQLVERKGA IINISSVAGV YPYPGGNAYG GTKAFVSQFS LGLRSDLHGT GVRVTTIEPG
MAETEFTVVR THGDQAASDK LYTGANPMTA EDIAEQIFWV ATLPPHLNIN RLELMPVSQS
FAGFQVAREG