Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smal_0253 |
Symbol | |
ID | 6477956 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stenotrophomonas maltophilia R551-3 |
Kingdom | Bacteria |
Replicon accession | NC_011071 |
Strand | - |
Start bp | 303003 |
End bp | 303692 |
Gene Length | 690 bp |
Protein Length | 229 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 642729387 |
Product | ABC transporter related |
Protein accession | YP_002026641 |
Protein GI | 194364031 |
COG category | [V] Defense mechanisms |
COG ID | [COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 0.588254 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGACCC TGGTTTCATT GCGCAACATC ACCAAGACCT ACCAGCGCGG CCCCGAAAAG GTGCAGGTGC TGCACGGCAT CGACCTGGAC ATCGCCAGCG GCGACTTCGT CGCGCTGATG GGCCCGTCCG GCTCGGGCAA GACCACCCTG CTCAACCTGA TCGGCGGCCT GGACAATCCC AGCGGCGGCG AGATCAGCAT CGAAGGCGAG CGCATCGACC AGATGAGCGG CGGCCAGCTG TCGACCTGGC GCAGCCACCA CGTCGGCTTC GTGTTCCAGT TCTACAACCT GATGCCGATG CTGACCGCGC AGAAGAATGT GGAACTACCG CTGCTGCTGA CCCATCTCAG TGCGGCGCAG CGCAAGCGCA ATGCGGAGAT CGCACTGACC CTGGTCGGCC TGGCCGACCG CCGCAGCCAT CGCCCGAATG AACTGTCCGG CGGCCAGCAG CAGCGCGTGG CGATCGCGCG CGCAATCGTC TCCGACCCGA CTTTCCTGAT CTGCGATGAA CCTACCGGCG ATCTTGACCG CCAGTCTGCC GAGGAGATCC TGGGCCTGCT GCAGCAGCTC AACCGCGAGC ACGGCAAGAC CATCATCATG GTCACCCATG ACCCGAAGGC CGCCGAGTAC GCCACGCACA CAGTGCACCT GGACAAGGGC GAGCTGGCCG ACGCGCCGCT GACCCACTGA
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Protein sequence | MSTLVSLRNI TKTYQRGPEK VQVLHGIDLD IASGDFVALM GPSGSGKTTL LNLIGGLDNP SGGEISIEGE RIDQMSGGQL STWRSHHVGF VFQFYNLMPM LTAQKNVELP LLLTHLSAAQ RKRNAEIALT LVGLADRRSH RPNELSGGQQ QRVAIARAIV SDPTFLICDE PTGDLDRQSA EEILGLLQQL NREHGKTIIM VTHDPKAAEY ATHTVHLDKG ELADAPLTH
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