Gene Smal_0253 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_0253 
Symbol 
ID6477956 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp303003 
End bp303692 
Gene Length690 bp 
Protein Length229 aa 
Translation table11 
GC content65% 
IMG OID642729387 
ProductABC transporter related 
Protein accessionYP_002026641 
Protein GI194364031 
COG category[V] Defense mechanisms 
COG ID[COG1136] ABC-type antimicrobial peptide transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.588254 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGACCC TGGTTTCATT GCGCAACATC ACCAAGACCT ACCAGCGCGG CCCCGAAAAG 
GTGCAGGTGC TGCACGGCAT CGACCTGGAC ATCGCCAGCG GCGACTTCGT CGCGCTGATG
GGCCCGTCCG GCTCGGGCAA GACCACCCTG CTCAACCTGA TCGGCGGCCT GGACAATCCC
AGCGGCGGCG AGATCAGCAT CGAAGGCGAG CGCATCGACC AGATGAGCGG CGGCCAGCTG
TCGACCTGGC GCAGCCACCA CGTCGGCTTC GTGTTCCAGT TCTACAACCT GATGCCGATG
CTGACCGCGC AGAAGAATGT GGAACTACCG CTGCTGCTGA CCCATCTCAG TGCGGCGCAG
CGCAAGCGCA ATGCGGAGAT CGCACTGACC CTGGTCGGCC TGGCCGACCG CCGCAGCCAT
CGCCCGAATG AACTGTCCGG CGGCCAGCAG CAGCGCGTGG CGATCGCGCG CGCAATCGTC
TCCGACCCGA CTTTCCTGAT CTGCGATGAA CCTACCGGCG ATCTTGACCG CCAGTCTGCC
GAGGAGATCC TGGGCCTGCT GCAGCAGCTC AACCGCGAGC ACGGCAAGAC CATCATCATG
GTCACCCATG ACCCGAAGGC CGCCGAGTAC GCCACGCACA CAGTGCACCT GGACAAGGGC
GAGCTGGCCG ACGCGCCGCT GACCCACTGA
 
Protein sequence
MSTLVSLRNI TKTYQRGPEK VQVLHGIDLD IASGDFVALM GPSGSGKTTL LNLIGGLDNP 
SGGEISIEGE RIDQMSGGQL STWRSHHVGF VFQFYNLMPM LTAQKNVELP LLLTHLSAAQ
RKRNAEIALT LVGLADRRSH RPNELSGGQQ QRVAIARAIV SDPTFLICDE PTGDLDRQSA
EEILGLLQQL NREHGKTIIM VTHDPKAAEY ATHTVHLDKG ELADAPLTH