| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smal_0227 |
|---|
| Symbol | |
|---|
| ID | 6477929 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Stenotrophomonas maltophilia R551-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011071 |
|---|
| Strand | + |
|---|
| Start bp | 276483 |
|---|
| End bp | 277514 |
|---|
| Gene Length | 1032 bp |
|---|
| Protein Length | 343 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 642729360 |
|---|
| Product | tRNA-dihydrouridine synthase A |
|---|
| Protein accession | YP_002026615 |
|---|
| Protein GI | 194364005 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0042] tRNA-dihydrouridine synthase |
|---|
| TIGRFAM ID | [TIGR00742] tRNA dihydrouridine synthase A |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.0489584 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 33 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCAGTCT CCACGATCAA CACCCCGATG ACGTCCGCCA CCGCCCGTTA CGCCGATTCC
CTGCGCCTGT CCGTTGCCCC GATGATGGAC TGGACGGACC GCCACTGCCG CGTGTTCCAT
CGCGTGCTGG CGCCGGGTGC GCGCCTGTAC ACGGAGATGG TGCACGCCAA CGCGGTCATC
CACGGCGACC GCGAGCGCCT GCTCGGCTTC GACCGCAGCG AGCAGCCGCT GGCGCTGCAG
TTGGGTGGCA GTGATCCGGC CCTGCTGGCG CAGGCCGCAC GTATCGCTGC CGAGTGGGGC
TATGACGAGG TCAACCTCAA CTGCGGCTGC CCGTCTGATC GTGTGCAGGC CGGCCGCTTC
GGCGCCTGCC TGATGCGCGA GCCGGCGCTG GTGGCCGAGT GCGTGGCGGC CATGGTCAAT
GCGGTTGATA TCCCGGTGAC GGTGAAGTGC CGGCTGGGCG TGGACGAGGA CAACGACTAC
GACGTGTTCG CCGCCTTCGT CGACCGCCAG GTCGCCGCCG GTGCGGCGAT GGTGGTGGTG
CACGCGCGCA ACGCGTGGCT GAAGGGCCTG TCGCCGAAGG AGAACCGCGA GGTTCCCCCG
CTCAAATACG ACTGGGCCTA CCGCTTGAAG CAGGAGCGCC CGGCACTGCC GGTGGTGCTC
AATGGCGGCC TGGCCAGCCT CGAGGCGGTG CAGGCGCAGG CCGTGCACGT CGATGGCGTG
ATGCTGGGCC GCGCGGCCTA CCACGATCCC TATCTGCTGC ATCAGCTGGA GGCGTTGCAT
ACCGGCGCCC CGCTGCAGGC CCGTGGCGAC CTGCTGCGCG CGCTGCGGCC CTATGTGGAA
GCGCGGCTGG GCGAAGGCCT GGCGCTGAAG CACATCACCC GCCACGTGCT TGGCCTGTTC
CACGGCCAGG CCGGCGGCCG CGCATTCCGC CAGGTGCTGA GCGAGGGCGC ACACCGCCCG
GGCGCCGATT GGCGCCTGAT CGAGCAGGCG CTGGCGGTCA CCGAACGTGC ATCTGATCGC
GCCGTAGCGT GA
|
|---|
| Protein sequence | MPVSTINTPM TSATARYADS LRLSVAPMMD WTDRHCRVFH RVLAPGARLY TEMVHANAVI
HGDRERLLGF DRSEQPLALQ LGGSDPALLA QAARIAAEWG YDEVNLNCGC PSDRVQAGRF
GACLMREPAL VAECVAAMVN AVDIPVTVKC RLGVDEDNDY DVFAAFVDRQ VAAGAAMVVV
HARNAWLKGL SPKENREVPP LKYDWAYRLK QERPALPVVL NGGLASLEAV QAQAVHVDGV
MLGRAAYHDP YLLHQLEALH TGAPLQARGD LLRALRPYVE ARLGEGLALK HITRHVLGLF
HGQAGGRAFR QVLSEGAHRP GADWRLIEQA LAVTERASDR AVA
|
|---|
| |