Gene Smal_0219 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_0219 
Symbol 
ID6477921 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp266856 
End bp268361 
Gene Length1506 bp 
Protein Length501 aa 
Translation table11 
GC content65% 
IMG OID642729352 
Productmethylmalonate-semialdehyde dehydrogenase 
Protein accessionYP_002026607 
Protein GI194363997 
COG category[C] Energy production and conversion 
COG ID[COG1012] NAD-dependent aldehyde dehydrogenases 
TIGRFAM ID[TIGR01722] methylmalonic acid semialdehyde dehydrogenase 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGTTG CAGCGCCCCG TATCCGCATG CTGATCGATG GCCAGTTCGT TGAATCGGCT 
ACTTCCCACT GGCAGGACGT GATCAATCCG GCCACCCAGG ACGTGCTGGC CAAGGTGCCG
TTCGCCACCA CCGGCGAAGT GGACGCCGCC GTCGCCGCCG CCAAGGAAGC CTTCAAGACC
TGGCGCAAGA CCCCGATCGG CACCCGCGCG CGCATCTTCC TGAAGTACCA GCAGCTGATC
CGCGAGAACA TGAGCGAGCT GGCGCACATC CTCACCGCCG AGCAGGGCAA GACCCTGCCC
GACGCCGAAG GCGATGTGTT CCGCGGCCTG GAAGTGGTCG AGCACGCTGC CGCCATCGGC
AACCTGCAGC TGGGCGAGCT GGCCAACAAC GTGGCCACCG GCGTCGATAC CTACTCGATC
ATGCAGCCGC TGGGCGTGTG CGCCGGCATC ACCCCGTTCA ACTTCCCGGC GATGATCCCG
TTGTGGATGT TCCCGATGGC CATTGCCACC GGCAACACCT TCATCCTCAA GCCGTCCGAG
CAGGACCCGA TGGTCACCAT GCGCCTGGTC GAGCTTGCTC TGGAAGCAGG CATCCCGAAG
GGCGTGCTGA ACGTCGTCCA CGGCGGCGAG GAAGTGGTCA ACGCGATCTG CGACCACCCG
GACATCAAGG CCGTGTCGTT CGTCGGTTCC ACCCGCGTCG GCACCCACGT CTACAACCGC
GCCTCGCTGG CCGGCAAGCG CGTGCAGTGC ATGATGGGTG CCAAGAACCA CGCCGTGGTG
CTGCCGGACG CCAACAAGGA ACAGACCCTC AACGCGATGG TCGGTGCCGC CTTCGGTGCC
GCGGGCCAGC GCTGCATGGC CGCCTCCACG CTGGTGCTGG TCGGTGAAGC ACGCAACTGG
GTGCAGGACC TGGTCACCAA GGCCAAGACC CTGAAGGTCA GCGCCGGCAC CGTGTCCGGC
ACCGACGTCG GTCCGGTCAT TTCCTGCAGC GCCCGCGAGC GCGTGGAAGG CCTGATCGCC
TCGGGCGTGG AGCAGGGCGC CAAGCTGGTG CTGGATGGCC GCAAGCCGCA GGTCGATGGC
TTCGAGAAGG GCAACTTCGT CGGCCCGACC ATCTTTGCCG GTGTCACCAC CGACATGCGC
ATCTACCAGG AAGAAATCTT CGGGCCGGTG CTGGTCATCC TCGAAGCAGA AACGCTGGAA
GACGCCATCG CGATGGTCAA CAGCAACCCG AATGGCAACG GCACCGCACT GTTCACCCAG
TCCGGCGCGG CCGCGCGCAA GTTCCAGGAA GACATCGACG TCGGCCAGGT CGGCATCAAC
GTGCCGATCC CGGTGCCGGT GCCGCTGTTC TCGTTCACCG GTTCGCGCGC CTCCAAGCTG
GGTGACCTGG GCCCGTATGG CAAGCAGGTG GTGCTGTTCT ACACCCAGAC CAAGACGGTC
ACCGCGCGCT GGTTCGATGA CGAGACGCTG AGCCACGGCG TCAACACCAC GATCAGCCTG
AAGTAA
 
Protein sequence
MTVAAPRIRM LIDGQFVESA TSHWQDVINP ATQDVLAKVP FATTGEVDAA VAAAKEAFKT 
WRKTPIGTRA RIFLKYQQLI RENMSELAHI LTAEQGKTLP DAEGDVFRGL EVVEHAAAIG
NLQLGELANN VATGVDTYSI MQPLGVCAGI TPFNFPAMIP LWMFPMAIAT GNTFILKPSE
QDPMVTMRLV ELALEAGIPK GVLNVVHGGE EVVNAICDHP DIKAVSFVGS TRVGTHVYNR
ASLAGKRVQC MMGAKNHAVV LPDANKEQTL NAMVGAAFGA AGQRCMAAST LVLVGEARNW
VQDLVTKAKT LKVSAGTVSG TDVGPVISCS ARERVEGLIA SGVEQGAKLV LDGRKPQVDG
FEKGNFVGPT IFAGVTTDMR IYQEEIFGPV LVILEAETLE DAIAMVNSNP NGNGTALFTQ
SGAAARKFQE DIDVGQVGIN VPIPVPVPLF SFTGSRASKL GDLGPYGKQV VLFYTQTKTV
TARWFDDETL SHGVNTTISL K