Gene Smal_0212 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_0212 
Symbol 
ID6477914 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp258286 
End bp259197 
Gene Length912 bp 
Protein Length303 aa 
Translation table11 
GC content70% 
IMG OID642729345 
Producttranscriptional regulator, LysR family 
Protein accessionYP_002026600 
Protein GI194363990 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.986643 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.756698 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCTGT TGCAATTGAT CCGCAGCTTC ACCCGCACCG CAGAGACCGG CAGCATTGCC 
GCTGCGGCCC GCATCCTTGG CATCAGCGCC ACCGCAGTCG GCCAGAACAT CAACCGGCTG
GAGGCGCATC TGGGCGTACG GTTGCTGAAC CGAAGTACGC GCCAGCTGGC CCTCAGCGAG
GCCGGCGCGT TGTACCTGGC GCAGGTGCGC CACATCGAAG CCGACCTGGC GCGCGCGCAG
GCGATGGTCA CCTCCGGTGA CATCGAACCG GCAGGACCGC TGCGCATCGC CAGCAGCAGC
GCGTTCGGTC GCCACGTGCT TGCGCCGTTG CTGCCTTCGC TGCAGCAGCG CTACCCGCAA
CTGCAGCTGG AGCTGCGGCT GACCGATCGC GCCGTGCAGC ACGGCCCGGA AGCGGTGGAT
GCCAGCATCC GCATCGGTGC ACAGCTGGAG GACGGGGTCG TCGCACGGCA GCTGGCGCGC
GTGCCGTTCG TGTTCTGCGC CTCGCCGGCC TACCTGAAGG CACACGGCAC CCCGCAGCAA
CCCTCCGAGC TGAGCGGCCA TCGCGGGCTG CTGCACCGCT TTCCCACCGA CGGCCGGCCG
CTGCGCTGGG GACTGCTGAA GGATGGCCAG CGCGTGGACG CGGCACTGCC ACCGAGCATG
GTCTGCGATG ACATCGATGC GCTGGCGACG CTGGCGGTGG CCGGTGCCGG CATCACGCGG
TTGGCTGCAT TCGTGGCCGA GCCCTACCTG CGCGATGGCC GCCTGCAGGC GGTGTTCGGT
GCCGACAGCG AATGGCGCCC GGCGCCGATG GAGGTCTATT TCTGCGTCAG CGACCGCCGC
GACTTCACCG CCAAGATCCG CGCGCTGTTC GAGCACCTGC AGGCCGGCAT GGCGCCGGCC
TGGCGGGTGT GA
 
Protein sequence
MNLLQLIRSF TRTAETGSIA AAARILGISA TAVGQNINRL EAHLGVRLLN RSTRQLALSE 
AGALYLAQVR HIEADLARAQ AMVTSGDIEP AGPLRIASSS AFGRHVLAPL LPSLQQRYPQ
LQLELRLTDR AVQHGPEAVD ASIRIGAQLE DGVVARQLAR VPFVFCASPA YLKAHGTPQQ
PSELSGHRGL LHRFPTDGRP LRWGLLKDGQ RVDAALPPSM VCDDIDALAT LAVAGAGITR
LAAFVAEPYL RDGRLQAVFG ADSEWRPAPM EVYFCVSDRR DFTAKIRALF EHLQAGMAPA
WRV