| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smal_0201 |
|---|
| Symbol | |
|---|
| ID | 6477903 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Stenotrophomonas maltophilia R551-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011071 |
|---|
| Strand | + |
|---|
| Start bp | 245598 |
|---|
| End bp | 247043 |
|---|
| Gene Length | 1446 bp |
|---|
| Protein Length | 481 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 642729334 |
|---|
| Product | Endonuclease/exonuclease/phosphatase |
|---|
| Protein accession | YP_002026589 |
|---|
| Protein GI | 194363979 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2374] Predicted extracellular nuclease |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.418254 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 0.692055 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGTCGCC GTTCCCTCGT TCTTGCCCTG TCCCTGCTGC TGCCGGCCGG CGCCTTCGCC
CAGGCCCAGC CGCAGGTCGC ACCGGTCGCG TCACCCGCCG CCGCGCGCAA CAGCGCCACC
GTGGTGCTGA CCGCCGCGCC GGCCGACTGG CGTGCACTGG ATGGCCAGCA CGTGCGCATC
GCTGCGCCAC TGATCCTGGC CGGCACCGAT GGCCTTGAGC GCTTTGGGCA GCTCACCGTG
GCCTTCGATG GCCGCCTCTG GCAGCCGACC GAAGTGGCCG CGCCGGGTAC TGCCGGCTAC
GAGCAGGCGA TGGCCGACAA CCAGCGCCGT CGCCTGGTGC TGGACGATGG CAGCGATGCC
CGTGATCCGG CCAGCGTGGC CTACCTGCCG GCCAACCCGG TACTGCGCAC CGGCATGCAG
CTGCGCAATG TGGAAGGCGT GGTGAACGTG GATGCACAGG GTCGGCCGCG CCTGCAGGTC
GAAGGCGTGC TGAAGCTGCC GGAGCTAAAG CGTCCGGCGG TGCCGACGGT ACCGGGCAGC
CTGCATGTGG CCGCCTTCAA CCTGGAGAAT TTCTTCAATG GCGACGGCCA GGGCGGTGGC
TTCCCGACCC TGCGCGGTGC GCGCACGCCG GATGAGCACA AGGCGCAGGT GGCCAAGCTG
GTGACCACGG TCAACGCGCT GGGCGCCGAT GTCGCTGCAC TGATGGAGCT GGAGAACGAC
GGCTACGGCC CGCAGTCGGC CATCGCCGAA CTGGTCGATG CGCTCAACCG CGATCGTGGC
GGGCAGGGTG ACTGGCGCTT CGTCGACGCC GGCAGCGGCC CCGGTGAAAA CCCGATCCGG
GTCGGCATCA TCTACCGCAG CACGCGCCTG CAGCCGGTCG GCAAGCCGGC CACGCTGACC
GGAGGCCCGT TCGTCGAGCA CAGCCGCGTG CCGTTGGCGC AGGCCTTCCA GGGCAAGCAG
GGCGCACCGT TCGTGGTGGT CGCCAACCAC TTCAAGTCGA AGGGCTGCCG CGATGCGAGC
GGCGCCGACG CCGACCGCAA CGACAACCAG GGCTGCTGGA ACGCCACCCG CGTGACCTCA
GCGCAGCAGC TGCACGCCTG GCTGCAGACC GACCCGACCG GTACCGGTGC CAAGGACGCG
GTGCTGCTGG GTGACTTCAA TGCCTACGCG ATGGAAGACC CGATCCGCAC CCTGCATGAC
CTCGGCTGGC AGGACGCATT CAAGGTCGCC AAGGTCGAGC ATCCCTACAG CTACGTCTAC
AACGGCTATA CCGGCCGCCT CGACCACGCC CTGCTGAATC CGGGCATGGC CAAGCGCCTG
CGCGGTGCCG CCGAGTGGCA CAGCAATGCC GACGAACAGG ACGCCAGCGG CTACCAGGGC
CGCAACGTGC AGGGCCCGTG GCGCAGCTCC GACCACGATC CGCTGCTGCT GGGTTTCGAC
AAATAA
|
|---|
| Protein sequence | MRRRSLVLAL SLLLPAGAFA QAQPQVAPVA SPAAARNSAT VVLTAAPADW RALDGQHVRI
AAPLILAGTD GLERFGQLTV AFDGRLWQPT EVAAPGTAGY EQAMADNQRR RLVLDDGSDA
RDPASVAYLP ANPVLRTGMQ LRNVEGVVNV DAQGRPRLQV EGVLKLPELK RPAVPTVPGS
LHVAAFNLEN FFNGDGQGGG FPTLRGARTP DEHKAQVAKL VTTVNALGAD VAALMELEND
GYGPQSAIAE LVDALNRDRG GQGDWRFVDA GSGPGENPIR VGIIYRSTRL QPVGKPATLT
GGPFVEHSRV PLAQAFQGKQ GAPFVVVANH FKSKGCRDAS GADADRNDNQ GCWNATRVTS
AQQLHAWLQT DPTGTGAKDA VLLGDFNAYA MEDPIRTLHD LGWQDAFKVA KVEHPYSYVY
NGYTGRLDHA LLNPGMAKRL RGAAEWHSNA DEQDASGYQG RNVQGPWRSS DHDPLLLGFD
K
|
|---|
| |