Gene Smal_0181 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_0181 
Symbol 
ID6477812 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp221595 
End bp223751 
Gene Length2157 bp 
Protein Length718 aa 
Translation table11 
GC content65% 
IMG OID642729314 
ProductPeptidyl-dipeptidase Dcp 
Protein accessionYP_002026569 
Protein GI194363959 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0339] Zn-dependent oligopeptidases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.585787 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGCGTA CCGTAGTCCT GGCCGCCGCC ATCAGCCTGG CGCTGGCGGC CTGTTCCGGC 
AAGGAGTCCA CCCCCGTGTC CGATGCCCAG AAAGCCCCTG CCCAGCAGCC GGCCGAAGCC
TCCACCAACC CGCTGCTGAG CGCCAGCACG CTGCCGTTCC AGGCGCCGCA GTTCGACAAG
ATCAAGGACA GCGACTACCT GCCGGCCTTC GAAGAAGGCA TGCGCCAGCA CCTGGCCGAT
GTCCGCAAGA TCGCTGACAA CCCTGAGCCG GCCACCTTCG ACAACACGCT GGTGGCGATG
GAGCGCAGCG GCGAGACCCT GAACCGCGTG TCGCGCATCT TCTTCGGCCT GGTCCAGGCC
GACGGCACCG AAGCGCGCCA GAAGATCCAG GAAGACATCG CACCGAAGCT GGCCGCGCAC
CAGGACGAGA TCAACCTCGA CCCGAAGCTG TTCGCGCGCG TGAAGTCGCT GTACGACCAG
CGTGACACGC TGGAGCTGGA CCCGGTGCAG AAGCGCCTGG TCGAGCATTA CTACGACGGC
CTGGTGCGCG CCGGCGCGCA GCTGTCCGAC GCCGACAAGG CGAGCCTGCG CAAGCTCAAC
GTGGAAGAGA CCACCCTCTC CACCCAGTTC CACACCCGCC TGGTGGCCGC TACCGCCGCT
GCCGCCGTGG TCGTCGACGA TAAGGCCAAG CTGGCCGGCC TGGACGACAA TGCGATCAAC
AACGCTGCGT CTGCCGCCAA GGATCGCAAG CTGGATGGCA AGTTCCTGCT GCCGCTGCAG
AACACCACCC AGCAGCCGGT GCTCGGTTCG CTGACCGACC GTGACCAGCG CGCCGCTGTG
CTGAAGGCTT CGGAAACCCG CGCCGAGCGT GGCGATGCCA ACGACACCCG GCAGACCGTG
CAGCGCCTGG CCCAGCTGCG TGCGCAGAAG GCCAAGCTGC TCGGCTTCGA CACCTTCGCC
GACTACCAGC TGGGCGACCA GATGGCCAAG ACCCCGGCCG CTGCGCTCAA GCTGCTGACC
GACACCGTGC CGGCCGCCAC TGTCAAGGCG CGTGCCGAAG CCGGCGAGAT CCAGAAGGTG
ATCGACGCGC AGAAGGGTGG TTTCCAGGTC GCCGCTTCGG ACTGGGACTT CTACGCCGAG
CAGGTGCGCA AGGCCAAGTA CGATCTGGAC GAGTCGCAGA TCAAGCCGTA CTTCGAACTG
GACAACGTGC TGCAGAACGG CGTCTTCTAC GCCGCTACCC AGCTGTACGG CATCACCTTC
AAGCCGCGTA CCGACATTCC GACCTACAAC CCGGACATGA AGGTGTACGA AGTGTTCGAC
AAGGATGGCA CCTCGCTGGC CCTGTTCTAC ACCGACTACT TCAAGCGTGA CACCAAGTCC
GGCGGCGCGT GGATGGATGT GTTCGTCGAA CAGGACGGTC TGACCGGTGC CAAGCCGGTG
GTCTACAACG TCTGCAACTT CACCAAGCCG GCCGACGGCC AGCCTGCGCT GATCAGCTTC
GACGACGTCA CCACGATGTT CCATGAGTTC GGCCATGCGC TGCACGGCAT GTTCTCGAAC
GTGAAGTACC CGTCGATCGC CGGTACCGCC ACCTCGCGCG ATTTCGTCGA GTTCCCCTCG
CAGTTCAACG AGCACTGGGC GCTGGATCCG AAGGTGTTCG CCAACTACGC CAAGCACTAC
AAGACCGGCG AGGCGATGCC GCAGGAACTG GTCGACAAGA TCCTCAAGGC ACGCAGCTTC
AACCAGGGCT ACGCGACCAC CGAGTACCTG TCGGCCGCAC TGCTCGACCT GGCTTGGCAC
ACGCAGAAGG CTGACGCCCC GCTGCAGGAT GTTGGCGCTT TTGAGGCCAG CGCGCTGAAG
AAGTTCAAGG TCGACCTGCC GCAGGTGCCG CCGCGTTACC GCACCACCTA CTTCGACCAC
ATCTGGGGTG GCGGCTACTC GGCCGGTTAC TACGCCTACT TCTGGGCCGA GGTGCTGGAC
CATGACGCCT ACCAGTGGTT CACCGAACAC GGTGGCCTGA CCGCGGCCAA CGGCCAGGAG
TTCCGCGACA AGATCCTCTC GCGCGGCAAC AGCGTGGAAC TGTCGACCCT GTACCGCGAT
TTCCGCGGCA AGGACCCGTC GGTGGAGCCA CTGCTGAAGT TCCGCGGGCT GAAATAA
 
Protein sequence
MSRTVVLAAA ISLALAACSG KESTPVSDAQ KAPAQQPAEA STNPLLSAST LPFQAPQFDK 
IKDSDYLPAF EEGMRQHLAD VRKIADNPEP ATFDNTLVAM ERSGETLNRV SRIFFGLVQA
DGTEARQKIQ EDIAPKLAAH QDEINLDPKL FARVKSLYDQ RDTLELDPVQ KRLVEHYYDG
LVRAGAQLSD ADKASLRKLN VEETTLSTQF HTRLVAATAA AAVVVDDKAK LAGLDDNAIN
NAASAAKDRK LDGKFLLPLQ NTTQQPVLGS LTDRDQRAAV LKASETRAER GDANDTRQTV
QRLAQLRAQK AKLLGFDTFA DYQLGDQMAK TPAAALKLLT DTVPAATVKA RAEAGEIQKV
IDAQKGGFQV AASDWDFYAE QVRKAKYDLD ESQIKPYFEL DNVLQNGVFY AATQLYGITF
KPRTDIPTYN PDMKVYEVFD KDGTSLALFY TDYFKRDTKS GGAWMDVFVE QDGLTGAKPV
VYNVCNFTKP ADGQPALISF DDVTTMFHEF GHALHGMFSN VKYPSIAGTA TSRDFVEFPS
QFNEHWALDP KVFANYAKHY KTGEAMPQEL VDKILKARSF NQGYATTEYL SAALLDLAWH
TQKADAPLQD VGAFEASALK KFKVDLPQVP PRYRTTYFDH IWGGGYSAGY YAYFWAEVLD
HDAYQWFTEH GGLTAANGQE FRDKILSRGN SVELSTLYRD FRGKDPSVEP LLKFRGLK