Gene Smal_0174 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_0174 
Symbol 
ID6477805 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp215958 
End bp216593 
Gene Length636 bp 
Protein Length211 aa 
Translation table11 
GC content71% 
IMG OID642729307 
ProductSterol-binding domain protein 
Protein accessionYP_002026562 
Protein GI194363952 
COG category[S] Function unknown 
COG ID[COG3165] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTCTCT CCCTGCTCAA GTCCCTCAAG CCGGTCGCTG GCCGCGCCCT GCAGATCGCC 
CTGAACCGCG CGCTGGCGCT GGATCCGGAT ACCCGCCATG CACTGGCCAG CCTCGACGGC
CGGCACATCG ACCTGACCCT GGAAGCGCCC TCGCTGGCGA TGCGCATCAG CGTCGATGGC
GACCAGCTGC GGGTTGGCCC GGTGGACGCA CAGGAAGCCG ACCTGGCCGT GCGCAGCAGC
CTGGCCGGCG TGCTGGCGCA GCTGCCGCTG CTGGCCAACG CACGGCGCGG CGACAACAAC
GGCAAGGGTC GCGTGCGCGT GGCCGGTGAT GCCGAACTGG CGCGTCGCCT GCAGCAGCTG
GCCAAGGGCT TCGACCCGGA CTGGCAGCAG CCCTTCGTCA GCGTGTTCGG CGAGGTGCTG
GGCGTGCAGG TGGCCAACAC CCTGCGCGGT GCCCTTCAGC ACGCGCGCCA GGGCGCGATC
GACCTGGCCC ACAGCGCCGC CGAATTCATC ACCGAGGAAT CGCGCGACGT GGTGCCGCGC
GCCGAGCTCG ATGCCTTCCA CGATGACGTG GACGTGTTGC GCGATGACGT CGAGCGACTG
GGTGCACGCG TACAGCGCCT GCGGGGTGCC GCATGA
 
Protein sequence
MALSLLKSLK PVAGRALQIA LNRALALDPD TRHALASLDG RHIDLTLEAP SLAMRISVDG 
DQLRVGPVDA QEADLAVRSS LAGVLAQLPL LANARRGDNN GKGRVRVAGD AELARRLQQL
AKGFDPDWQQ PFVSVFGEVL GVQVANTLRG ALQHARQGAI DLAHSAAEFI TEESRDVVPR
AELDAFHDDV DVLRDDVERL GARVQRLRGA A