| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smal_0150 |
|---|
| Symbol | |
|---|
| ID | 6477781 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Stenotrophomonas maltophilia R551-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011071 |
|---|
| Strand | - |
|---|
| Start bp | 186213 |
|---|
| End bp | 188402 |
|---|
| Gene Length | 2190 bp |
|---|
| Protein Length | 729 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 642729283 |
|---|
| Product | TonB-dependent siderophore receptor |
|---|
| Protein accession | YP_002026538 |
|---|
| Protein GI | 194363928 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG4773] Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid |
|---|
| TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACCGCT GCCTGCGCCC CAACCTGCTC TCCCTCGCCC TCTGCGCCGC GCTGCCGCTG
CATGCCAGCG AGGCCGATGC ATCTCCCGAT GCGGCTGCCA CTGGTGCCGA ACGCTCGCCG
ACCGAACTGG CGGCAGTGCG CGTGCAGGCC GGCAAGCCGA AGGCCGATAC CTCGCGCGTG
AACGCCTTCG GTGGTGGTTC CTGGAAGGAG ACGCCGGCGT CGGTGAACGT GCTTGAGCGC
GACTACCTCG ACCGCCGCCA GGTGCGTTCG CTGTCCGAGC TGGCCAGCAA CGATGCCTCG
CTGGGCGATG CGTACGCGCC GGTCGGCTAC TACCAGAACA TCGCCATCCG TGGCTTCGCG
CTGGACGCCG CCACCGGCTA CCGCTTCAAC GGCCTGTCCA TCGCCGGCGA ACAGCGCCTG
GCGCTGGAGA ACGTGCAGTC GGTTGAGATC CTCAAGGGTG AAGCTGGCCT GGCTGCAGGC
GTGATGGCAC CCGGCGGCAT CATCAACTAC ATCGGCAAGC GACCGGCCGA AGTGCGCACG
GTCACCCTCG GCACCGATTC GGAAGGCTCG CGCTACGCCG CCGTCGATGT CGGCCACTGG
ATCACCCCGC GTTTCGGCCT GCGCCTGAAT GCCGCATGGG ATGCCAGCAA TTCCTATGTC
GAGCACGCCG ATGGCCGTCG CAACTTCTAT TCGCTGGCCG CCGACTGGCT GATCGGCGAA
CGCGGCAAGC TGGAAGTGGA TGCCAACTAC CAGACCAGTT CGCAGCGCTC GGTGTCGGGC
TACCAGCTGC TGGGCGCGCG CGAGCTGCCG CACGGCGTGG ATCGCGAATT CCTGCTCGGC
TACCAGCCGT GGCAGCGCCC GGTGGATATC GCCAGCACCA ACATCACCGC GTTGCACACC
TACGACTTCA ACGATGCCTG GCAGTCGCGC GTCTCGGTCG GCCACAGCCG CTCGGTGATC
GATGACAACG TCGCCTTCGC CTATGGCTGC TACTACGCCA CGCAGTGCGC CGATGGCAGC
GTGCCGGGCA ACTACTTCGC GCCCAATGGC GACTACGACG TCTACGACTA CCGCAGCCCG
GACGACACCC GCCGCAACCA GCAGGCCCGT GCCGAGCTGC GTGGCCGCTT CGAGACCGGC
AGCGTCGGCC ACCAGCTGAC CCTCGGTGCC GATTACTTCC GCCGCACCGT GGACAAGCGC
CCGAGCGTCA ACGAGTACGT CGGCACCAGC AACATCCACG ATGCGCAGGT ACCGGTGTTC
GAACCGTCGC CGAAGATGCC CGGCCCCTCC GCACGACGCC TGGACAGCCG CCAGACCGCG
TTCTTCGCGC TGGACCGGAT GAGCTTCGGT GATGACTGGC AGTGGCTGGC CGGCGGCCGC
TTCGTGCGCC TGGACGAGCG TGCCTACGAC AAGCGTGGTA CCCCGCAGCG GCACAGCCGC
CTGTCGCGTT TCCTGCCGCA GACCGCCGTG GTGTGGAAGG CCACCGATCA GCTCAATGCC
TATGCCAGCT ATGTGCGCGG CATCTCGCTG GGCCAGGAAG CGCCGTTCTG GACCAGCAAT
GCCGACACCT TCCTGCCATC GGTGCAGTCG CGCCAGCTGG AAGTGGGCGT GAAGTACGTG
CCGGTCGAGG CGCTGACGCT GGGCGCAGCC GTGTTCCGCA TCTCGCAGCC GTACCAGTAC
GCCAAGCCGG ACAGCAGCGA CGTCGGCTAC ACCTTCGTCG AGGAAGGCAC GCAGACCCAC
ACCGGCCTGG AGCTGACTGC CAACGGGCAG CTGACAGACG CGCTGCAGAT CGTGGCCAGC
GCCAGCGTGC TGCAGGCGCG CGCGCGCGAC ACCGGCACCC CGGCCTATGA AGGCCATCAG
TTGGTGAATG TGCCAAAGGT GCGCGCCAGC GTGCACGTGG CCTATGCGCT CCCGTTCGTG
CAGGGCCTGG ATGTGACCGG CGGCTGGCGC TATGCCGGTG CCAACGTGGC ACGCGCCGAC
GGTGGTGTAC GCGCACCGGA CTACTCGGTG TTCGATGCCG GCCTGCGCTT CCAGCACCGC
CTGCACGAAC GTGCGGTGAC CTGGAACCTG TCGGTGGATA ACGTGTTCAA CCGCTTCTAC
TGGCGCGATA CCGGCAGCAG TGGTGGTGAC TACTACCTGT TCCCCGGCGC ACCGCGACAG
GCCCGCCTGT CGGTGACGTT CGCACTGTGA
|
|---|
| Protein sequence | MNRCLRPNLL SLALCAALPL HASEADASPD AAATGAERSP TELAAVRVQA GKPKADTSRV
NAFGGGSWKE TPASVNVLER DYLDRRQVRS LSELASNDAS LGDAYAPVGY YQNIAIRGFA
LDAATGYRFN GLSIAGEQRL ALENVQSVEI LKGEAGLAAG VMAPGGIINY IGKRPAEVRT
VTLGTDSEGS RYAAVDVGHW ITPRFGLRLN AAWDASNSYV EHADGRRNFY SLAADWLIGE
RGKLEVDANY QTSSQRSVSG YQLLGARELP HGVDREFLLG YQPWQRPVDI ASTNITALHT
YDFNDAWQSR VSVGHSRSVI DDNVAFAYGC YYATQCADGS VPGNYFAPNG DYDVYDYRSP
DDTRRNQQAR AELRGRFETG SVGHQLTLGA DYFRRTVDKR PSVNEYVGTS NIHDAQVPVF
EPSPKMPGPS ARRLDSRQTA FFALDRMSFG DDWQWLAGGR FVRLDERAYD KRGTPQRHSR
LSRFLPQTAV VWKATDQLNA YASYVRGISL GQEAPFWTSN ADTFLPSVQS RQLEVGVKYV
PVEALTLGAA VFRISQPYQY AKPDSSDVGY TFVEEGTQTH TGLELTANGQ LTDALQIVAS
ASVLQARARD TGTPAYEGHQ LVNVPKVRAS VHVAYALPFV QGLDVTGGWR YAGANVARAD
GGVRAPDYSV FDAGLRFQHR LHERAVTWNL SVDNVFNRFY WRDTGSSGGD YYLFPGAPRQ
ARLSVTFAL
|
|---|
| |