| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smal_0139 |
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| Symbol | |
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| ID | 6477770 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Stenotrophomonas maltophilia R551-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011071 |
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| Strand | - |
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| Start bp | 177464 |
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| End bp | 178846 |
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| Gene Length | 1383 bp |
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| Protein Length | 460 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642729272 |
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| Product | HipA N-terminal domain protein |
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| Protein accession | YP_002026527 |
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| Protein GI | 194363917 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3550] Uncharacterized protein related to capsule biosynthesis enzymes |
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| TIGRFAM ID | [TIGR03071] HipA N-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.388131 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGCCC CCCGTATCGA CCTCAAGGAC GTCATTACAA CGACCGTCCT GTCTGGACTG
CACTATCCGC TTCCACCACG CGAACTGCAG GTCAGCATCG ACGAAGCGCC GGTGGGCCGC
CTGACCGAAG CAGCAAACCT GTGGCGCTTC ACCTATGCGC CGGAGTGGCT CGGCAGCGCA
CATCGGTTTC CACTGGCGCC TGCGTTACCA CTGCAAGACA CCGCCATCCT CGATGGCTCC
AGCCAACGCC CCGTGCAGTG GTACTTCGAC AATCTGCTGC CGGAAGAGCA GCAACGCACG
CTGATGGCAA CCGATGCCAG GGTGGATGGC GCGGACGCGT TCGCATTGCT GGCCGCCTAT
GGCGCGGAAT CGGCTGGCTC GTTGACGCTG CTGCCTCCAG GCCAGCGCCT GCCACCCGGC
GGCAGAAAAC CACTGCCCGA TGCGGAACTC TCCACGCGTA TCCAAGGCCT GCCACGCACG
TCGCTTGCGG CGGGTGCCGC CAAGCGCATG TCACTGGCAG GTGCCCAGCA CAAGCTGGCA
ATCATCGAGA CAGGGGGAGA ACTCTACCAA CCTCTGGGCG CCGAGCCCTC GACCCACATC
CTCAAGCCTG ACAGCACCAG CAGCAGTTAT CCCCACAGCG TGGCCAACGA GTGGTTCGTG
ATGCGCCTTG CACAGCGCAT GGGGCTGCAG GTGCCGAAGA TCGAGCGCCG CTACGTACCG
GAGCCGGTCT TCATCATCGA GCGCTTTGAT CGCGAAATCA CCGCCGATGC CATCCATCGC
CGTCATGCCA TCGACGCCTG CCAGCTGCTC AACCTCGACC GGCAGTTCAA GTACACGCTC
GGCAGCATCG ACACCCTGAA GGTCATCGTC GAGCAATGCA GAAGCAAGCT CAAGACGCGC
GTCCGCCTGT TCGACTGGAT GATCTTCAAT GTACTCACCG GCAACAACGA TGCGCACCTG
AAGAACCTGA GCTTCCTGGT CGACAGCAGG GGCATCGAAC TGGCCCCCCA CTACGACCTG
CTGTCCACCG CATGTTACGA GACCCGCGCG TATGCCGACG AGGGCGCACG TTGGCCAGAA
CGCTCGGAAC TGTCGTGGCC CATTCTCGGT GTCGCGCGCT TCCACGACCT TCGTTTCGAG
CATCTGGTTT CTGCCGGTGA AGCGCTGGGC CTGGGAAGAC CAGCCGCCAC CCGGCAGCTG
CGCCATCAGA TCGACCGCAT CGCAGGCGAA GCCCAGGCGC TTTACGCGGA GGTGCTGCAG
GAAAACCAGC AATGGTTGAC CCGTTTCGAC ATCGGCCCAA GCCTGGAAGG CGAGGTGCAT
TTCCTGAGAA CGCTGGTCCA CGTGATCATC GCCGACATGG TGAGGCAGCT TTCACCGGCA
TGA
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| Protein sequence | MSAPRIDLKD VITTTVLSGL HYPLPPRELQ VSIDEAPVGR LTEAANLWRF TYAPEWLGSA
HRFPLAPALP LQDTAILDGS SQRPVQWYFD NLLPEEQQRT LMATDARVDG ADAFALLAAY
GAESAGSLTL LPPGQRLPPG GRKPLPDAEL STRIQGLPRT SLAAGAAKRM SLAGAQHKLA
IIETGGELYQ PLGAEPSTHI LKPDSTSSSY PHSVANEWFV MRLAQRMGLQ VPKIERRYVP
EPVFIIERFD REITADAIHR RHAIDACQLL NLDRQFKYTL GSIDTLKVIV EQCRSKLKTR
VRLFDWMIFN VLTGNNDAHL KNLSFLVDSR GIELAPHYDL LSTACYETRA YADEGARWPE
RSELSWPILG VARFHDLRFE HLVSAGEALG LGRPAATRQL RHQIDRIAGE AQALYAEVLQ
ENQQWLTRFD IGPSLEGEVH FLRTLVHVII ADMVRQLSPA
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