Gene Smal_0135 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_0135 
Symbol 
ID6477766 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp174462 
End bp174980 
Gene Length519 bp 
Protein Length172 aa 
Translation table11 
GC content66% 
IMG OID642729268 
Productpreprotein translocase subunit SecB 
Protein accessionYP_002026523 
Protein GI194363913 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1952] Preprotein translocase subunit SecB 
TIGRFAM ID[TIGR00809] protein-export chaperone SecB 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.415006 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGAAG AGACCACCAA CGGCGCGGTT GCGCCGGCCG ATGCCGCCAC CGGCCCCGCT 
TTCACCGTCG AGAAGATCTA CGTCAAGGAC GTTTCCTTCG AGTCGCCGAA TGCTCCGACC
ATCTTCAATG ACCAGGTGCA GCCGGAACTG CAGCTCAACC TGAACCAGCA GGTGCAGCGC
CTGGGCGAGA ACGCCTTCGA AGTGGTGCTG GCCGTGACCC TGACCTGCCA GGCCGGTGAG
CGCACCGCCT ACGTGGCTGA AGTGAAGCAG GCCGGCGTGT TCGGCCTGGT CGGCTTGGAC
CCGCAGTCGA TCGACGTGCT GCTCGGGACC CAGTGCCCGA ACATCCTGTT CCCGTACGTG
CGCCAGCTGA TCAGCGACCT GATCCAGGCC GGTGGCTTCC CGCCGTTCTT CCTGCAGCCG
ATCAACTTCG AAGGCCTGTA CGCAGAAACC CTGCGCCAGC GCCAGGAGCA GGGCGACGCA
CCGTCGCTGG CTGACTCCGA GCCGGCTGGC AACGCCTGA
 
Protein sequence
MSEETTNGAV APADAATGPA FTVEKIYVKD VSFESPNAPT IFNDQVQPEL QLNLNQQVQR 
LGENAFEVVL AVTLTCQAGE RTAYVAEVKQ AGVFGLVGLD PQSIDVLLGT QCPNILFPYV
RQLISDLIQA GGFPPFFLQP INFEGLYAET LRQRQEQGDA PSLADSEPAG NA