Gene Smal_0131 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_0131 
Symbol 
ID6477762 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp172096 
End bp172905 
Gene Length810 bp 
Protein Length269 aa 
Translation table11 
GC content72% 
IMG OID642729264 
Producturoporphyrinogen-III synthase 
Protein accessionYP_002026519 
Protein GI194363909 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1587] Uroporphyrinogen-III synthase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.239326 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGGCAA TGGCCGACCA TACGATACCC ACTGGCGCCG CCGGTTCCGA CGCGGACTGG 
ACCTTCATTT CGCTGCGGCC GCAGGGCCAG CATGCGGCGC TGCGCCGCGC CGTTGCTGGG
CTGGACGGGC ATCTGCTGGC GCTGTCGCCC TGGCGGCTGC AGCGCCTGCA TGGCACGCCA
GTGGTGCGCC AGCTGCAACG CGCGCTGAAC TGCGATCGGG TGGTGTTCAC CAGCCCGGCC
GCTGTAGCAG CGGCCGCGTC CCTGCTGCCG CTGGCCGACG CGCAGCGCAG CCCGTGGCTG
ACCGTGGGCG AAGGCACCGC GCGCGCGCTG CGGGCGCAGG GGGTCCACGA GGTACATGCG
CCGCAGCGGA TGGACAGCGA GGGCCTGCTG GCACTGCCGG TGCTGGCGGA CGTACGCGGC
CGGCGCATCG GGCTGGTGAC GGCCCCCGGC GGGCGCGGCC TGATCGCTGC GCAGTTGCAG
GCGGCCGGCG CCAGCATCGA ACGTGCCGAC GTCTACCAGC GTCGCCCGCT GCGCCTGTCG
CCACGCACGC TGGCTCGATT GGCGCATTCA GCGTATCCGT GGGTGCTGGC AGTCAGCAGT
GGCGAAGCGC TGCAGCATTT CTGGCGCCAG CTTCCACATG CCTTGCAACA ACGCCTGCAG
GCGCATGCCA GCGTGGTGGT CGCCAGTGAT CGGCTTCGCG AGCAGGCGCA GGCACTGGGC
CTGCAGCGCA TCAGCCGTAG CGCCGGCCCT GCCGGTGCAC AGCTGGTGAG CGCTGCACAC
GCCACGCTCA CCGTCCCGGC AGCGACCTGA
 
Protein sequence
MQAMADHTIP TGAAGSDADW TFISLRPQGQ HAALRRAVAG LDGHLLALSP WRLQRLHGTP 
VVRQLQRALN CDRVVFTSPA AVAAAASLLP LADAQRSPWL TVGEGTARAL RAQGVHEVHA
PQRMDSEGLL ALPVLADVRG RRIGLVTAPG GRGLIAAQLQ AAGASIERAD VYQRRPLRLS
PRTLARLAHS AYPWVLAVSS GEALQHFWRQ LPHALQQRLQ AHASVVVASD RLREQAQALG
LQRISRSAGP AGAQLVSAAH ATLTVPAAT