| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smal_0112 |
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| Symbol | |
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| ID | 6477661 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Stenotrophomonas maltophilia R551-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011071 |
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| Strand | + |
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| Start bp | 136241 |
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| End bp | 137965 |
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| Gene Length | 1725 bp |
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| Protein Length | 574 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 642729245 |
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| Product | Polypeptide-transport-associated domain protein ShlB-type |
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| Protein accession | YP_002026500 |
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| Protein GI | 194363890 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2831] Hemolysin activation/secretion protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.034369 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGAACAGG GACGTAATGT ACGCAGCCGC GCGTTGCAGT GGCGGTTGTC CGTGGCTGTG
GCACTGGCCA TGGCCGGTTT CCAGGCACCG GCCTGGGCGC AGGTGGTGTC ACCGGAGCAG
GAGTTGCTGC GGCAGCAGGA GCGCGAGCGC GCGCTGCGGG AACAACAGGA ATCCACGCCG
GATGTCCGGC TGCAGCCGGC CACCGAAGAC CTCGGCCATC TGCCGGCTGA CGAATCACCC
TGCTTCACCA TCAACAGCAT CGTGCTGCAG GGCGATCTGG CCGAACGCTT CCGTTGGGCA
CTGGCGGCAG CCGATCCGCG CAGCGACCCC GCAACCGGGC GCTGTCTGGG TACTGCCGGC
GTGGACATCG TGATGAAGCG CGTGCAGAAC GCGATCATCG AACGCGGTTA CGTCACCACG
CGCATTCTCG CCGCGCCCCA GGACCTGAAG ACCGGCATCC TGACGCTCAC GGTCGTGCCG
GGACGCGTCA ATGCCATCCG TTTCGCCGAC GGCGAAGGCC GTACCCCCGC CCTCTGGAAC
GCGGTGCGGG TGGCACGCGG CGAAGTACTG AACCTGCGTG ACATCGAGCA GGCGCTGGAA
AACCTGCAGC GCGTGCCGAC CGCGACAGTG GACATCCAGA TCGCGCCCCC GGCCGACGGC
GCGGCAGCCA AGCCGGGCGA GAGCGACCTG GTGATCAGCT GGCAGCAGGC GCGCCTGGTA
CGGGTCAACC TGACACTGGA CGATGCCGGG AGCCAGTCCA CCGGCAAGAT GCAGGCGGGT
ACCACAGTGT CGGTGGACAA CGCGGCCGGT CTCAGCGATC TGTTCTACAT CAACGTGGGC
AAATCGGTAC TCAACGGCAG TGAGCGTGGC ACCGACAGCT GGGCGGTGCA TTACAGCGTG
CCGCTGGGCG GATGGTTGCT GGGCGCCAAC GCCAGCAACT TCGACTATGA GCAGACCGTT
GCCGGCGCAT TCGAGAACTA CGTCTACAGT GGCTCCAGCC GCAACGCCGA GCTGCGCCTG
ACGCGCATGC TGTTCCGCAA CGCGCGCGCC AAGACCAGCA TGTACGCGCG CGGCTGGTAC
CGCGAATCGG ACAACTTCAT CAACGATACC GAGATCGAAG TGCAGCGCCG CCGCATGGCG
GGCTGGGAGC TGGGCCTGGG CCACCGTCAC TTCATCGGCA AGGCGACCCT GGATGTGAAC
CTGGCGTACC GCAAGGGTAC CGGCGCCTTC AACGCGCTGC GTGCGCCGGA AGAGGCCTTT
GGCGAAGGTA CGGCGCATGG CCGCATCTAT ACCGCGGACG CGCAGTTGCT GCTGCCCTTG
CAGTGGGGCA AGCAGAGCCT GCGCTACGTC GGCAGCTGGC GCGCGCAGTG GAACCGCTCG
CCGCTGGTGC CGCAGGATCG GTTCTCGATT GGTGGCCGCT ACACCGTGCG GGGCTTTGAT
GGCGAAATGT CGCTGACCGG TGAACGTGGC TGGTTGCTGC GCAATGAAGT GGGCGTGCCC
CTGGGCAGTG GCGTGGAAGC CTACGTCGCC GTTGATCACG GGCGTGTCGC CGGCCCGTCC
ACGGCCCGGC TGCTGGGCGA CCGGCTTACC GGTACCGCAC TCGGACTTCG CGGCGGCACC
CGCCATGTCA ACTGGGACGC CTTTGTCGGC AGCCCGTTGT CCAGGCCGCG CGGTTTCCAG
ACCGCCTACA CCACGTTTGG AATGAACCTG GGCATCTCGT TCTGA
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| Protein sequence | MEQGRNVRSR ALQWRLSVAV ALAMAGFQAP AWAQVVSPEQ ELLRQQERER ALREQQESTP
DVRLQPATED LGHLPADESP CFTINSIVLQ GDLAERFRWA LAAADPRSDP ATGRCLGTAG
VDIVMKRVQN AIIERGYVTT RILAAPQDLK TGILTLTVVP GRVNAIRFAD GEGRTPALWN
AVRVARGEVL NLRDIEQALE NLQRVPTATV DIQIAPPADG AAAKPGESDL VISWQQARLV
RVNLTLDDAG SQSTGKMQAG TTVSVDNAAG LSDLFYINVG KSVLNGSERG TDSWAVHYSV
PLGGWLLGAN ASNFDYEQTV AGAFENYVYS GSSRNAELRL TRMLFRNARA KTSMYARGWY
RESDNFINDT EIEVQRRRMA GWELGLGHRH FIGKATLDVN LAYRKGTGAF NALRAPEEAF
GEGTAHGRIY TADAQLLLPL QWGKQSLRYV GSWRAQWNRS PLVPQDRFSI GGRYTVRGFD
GEMSLTGERG WLLRNEVGVP LGSGVEAYVA VDHGRVAGPS TARLLGDRLT GTALGLRGGT
RHVNWDAFVG SPLSRPRGFQ TAYTTFGMNL GISF
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