Gene Smal_0106 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_0106 
Symbol 
ID6477655 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp129812 
End bp130423 
Gene Length612 bp 
Protein Length203 aa 
Translation table11 
GC content68% 
IMG OID642729239 
ProductPEBP family protein 
Protein accessionYP_002026494 
Protein GI194363884 
COG category[R] General function prediction only 
COG ID[COG1881] Phospholipid-binding protein 
TIGRFAM ID[TIGR00481] Raf kinase inhibitor-like protein, YbhB/YbcL family 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.0330816 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAATTGA GCAGTCACAG CCTGACCAAC GGTGCACCGA TCGACCGCGA GTTCGCCGCC 
GGCGATGCCG CCGGCTTCGC CCCGGACCGC AATCCGCACC TGGCCTGGAA CGGCGCGCCG
GAAGGCACGC GTTCGTTCCT GCTGGTGTGC GTGGACCCGG ACGTGCCGAC CGTGCCTGAA
ACGGTCGGCC GTACGGACAT GACCGTGCCG CGCGATCAGC CGCGCTGCGA TTTCGTGCAT
TGGGTGATGG CTGATATCCC GGCCTCGGTG CAGGAGATCG CAGCAGGCAG CTGCAGCGAC
GGCTTCGTGG TCAAGGGCAG GACCGCACCG GCTGGCCCGG CGGGCAGCCG CCAGGGCCTG
AACGACTTCA CCGGCTGGTT CGCCGGCAAC CCGGACATGG CCGGCGATTA CCTGGGCTAT
GACGGCCCGT ATCCGCCGTT CAACGACGAA CGCGTGCACC GCTATTTCTT CCGCGTATTT
GCGCTGGACG TGGCCTCGCT CGATCTGCCG GCGCGCTTCA CCGCCGCCGA TGCCTACCGC
GCCATGCACG GCCACGTGCT GGCCGAAGCC GCACTGCATG GCACCTACAC GTTGAACCCG
GCGCTGGGCT GA
 
Protein sequence
MQLSSHSLTN GAPIDREFAA GDAAGFAPDR NPHLAWNGAP EGTRSFLLVC VDPDVPTVPE 
TVGRTDMTVP RDQPRCDFVH WVMADIPASV QEIAAGSCSD GFVVKGRTAP AGPAGSRQGL
NDFTGWFAGN PDMAGDYLGY DGPYPPFNDE RVHRYFFRVF ALDVASLDLP ARFTAADAYR
AMHGHVLAEA ALHGTYTLNP ALG