| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smal_0105 |
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| Symbol | |
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| ID | 6477654 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Stenotrophomonas maltophilia R551-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011071 |
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| Strand | + |
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| Start bp | 127732 |
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| End bp | 129801 |
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| Gene Length | 2070 bp |
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| Protein Length | 689 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 642729238 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_002026493 |
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| Protein GI | 194363883 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3063] Tfp pilus assembly protein PilF |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.00688221 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCAAGACC AGATCATCCA AGCGCTGCGC CAGAACCAGG CCGACCAGGC CGTGCAGCTG
GCCCAGGCGT GGACCCGTGA TGAACCCGGC CTGGCCGAAG CCCACCGCTG GCTGGCGCTT
GCGCTGCAGC AGCAGGGCAA CGCCGAGCAC GCGATGGACG CCCTGCAGGA GGCGCTGCGC
CTGGCCCCGG ACGATGCCCA GCTGCACCTG CAGCAGGCCG GCCTGCTGCT GGCCCTGCGC
CAGTTCGAAG GTGCTGACGA GGCGTTGGCG CGCACCACCG GCCTCGATCC GAATTCCTTC
TCCGCCTACC TGATGCAGGC GCACCTGGCG ATCGGCCGCA ACGACTTCGA CGAAGCGGCG
CGCGTGTCGA CGTTGGCGTC GCGCGTCGAG CCGGATCACC CGGAGCTGCT GACCATCGAC
GGCATGGTTG CCCTGCGCCG CGGCGATGCG GATCGCGCGC TGTCGCTGCT GTCGGCCGCC
AGCAAGGCGT TGCCGGACGA TCCCCGCGTG TTGTATGCAC TGGGTTTTGC CTATCTGGGC
AAGGACATGC TGGCGTTCGC CGAGCAGTCG TTCCGTCGCG TGCTGGAACT GAACCCGTCG
CTTTCCTCGT TGCACGGCCT GGTGGTGCAG CTGGCGCTGC GCCAGGGCAA TGTGCCGGCT
GCGGCCGAAG CGATGCAGGT GGCCCTGCAG CAGCCGCAGA TGGACGTGCC GGCGATGCGT
CGCCTGGCCG GCGAGCTGTC GCTGCGCAGC GGCCAGCCGC TGCAGGCGCT GGAGTACCTG
CTGCCGCTGC TGGAAACGCA GCCGGATGAC CGCCAGATGC TGCAGCTGCT GCTGATGTCA
TGGCAGCGCC TGGGGCGTGA GGATGAAGCA CGTGCTCGAC TGGACGCGGT GCTGGAAAAC
AATGACCAGC TGCACGACGT GTGGCTGGCG CGGCTGGCGA TCGAGCAGGT GGGCAGCGAA
AGTGCGGTGA CCGCTGTCGA GCGCTGGATG GCAGCGATGC CCGAGCATCT GCCGGCACTT
GAGGCACGCC TGCGCCTGCA CGACATGGCC GGTGAACATG CGCAGGCCGA AGCGATTGCC
GAGCGTATCG TCAGCCAGGA GCCGGGTCGT GTCAGTGGCG AAACCCGCCT GGTTGAAGGC
CTGCTGCAAC GGGATCCGGC CGCTGCCGTG GCTCGCGTGC AGGCACTGAT CGACCTGGCG
CCGGAAGGCC ATCGCGCCGA TCTGCGGACG TGGATGGGCG AGATCCAGGA CCGTGCCGCG
CAGCCGCAGG AAGCGCTGCG TACGTGGATG GCGCTGCAGG CCGACCAGGC GCCGCAGCGC
CTGCCGCTGC CGCCGCAGGC CAAGGCCCCG CCGAGCTGGC CGGACAAGGG CGATATCGAC
GGTGATGCCA CCTCCGCGCC GATCTTCCTG TGGGGCGCAC CGGGTTCGGG CGTGGAGCGC
GTGGCGACCG GCCTGGCCGC CGCCAGCCCG GTGCTGCGCA GTGACCGCTA CACCAACACG
CCGCCCGATG ATGCGTTCCA GAACTACCAC ACGCTGCAGG ATCTGGCCTC GGGCGTGCTG
ACCCCGGAGC GGCTGGTGGA ACGCTGGCGC GAACAGCTGC CGGCACGTGG CCTGCAGAAC
GACACCGTGA TCGACTGGTT GCTGTGGTGG GACAACGCCC TGCTGTGGGC GCTGCGCCCG
CAGCTGCCGC AGGGCCGCCT GCTGCTGGTG CTGCGTGACC CGCGCGACAT GCTGCTGGAC
TGGGTGGCCT ACGGCGCCGC CGCGCCGCTG GCGATGACCT CGCTGGCCGA AGCCGGTGAG
TGGCTGGCGC GTGCGTTGAC CCAGGTCGCC ACGTTGCATG AGGAAGACCT GTACCCACAT
GTACTGCTGC GCATCGACCA TATCGGCAAC GATCCGCAGG CAATGGCTGA ACTGCTCGGC
CGCCTGTTCG AGCGGCCGAT GCCGCCGGCG GCGCAGCTGG GTGCACCGCG CCTGCCGCCT
GGCCATTGGC GCAACTACCG CGACGTGATG AGCGCCGCTT TCGCCCTGCT CACCCCGATT
GCGGTGCGCC TGGGTTACCC GGAAGAGTGA
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| Protein sequence | MQDQIIQALR QNQADQAVQL AQAWTRDEPG LAEAHRWLAL ALQQQGNAEH AMDALQEALR
LAPDDAQLHL QQAGLLLALR QFEGADEALA RTTGLDPNSF SAYLMQAHLA IGRNDFDEAA
RVSTLASRVE PDHPELLTID GMVALRRGDA DRALSLLSAA SKALPDDPRV LYALGFAYLG
KDMLAFAEQS FRRVLELNPS LSSLHGLVVQ LALRQGNVPA AAEAMQVALQ QPQMDVPAMR
RLAGELSLRS GQPLQALEYL LPLLETQPDD RQMLQLLLMS WQRLGREDEA RARLDAVLEN
NDQLHDVWLA RLAIEQVGSE SAVTAVERWM AAMPEHLPAL EARLRLHDMA GEHAQAEAIA
ERIVSQEPGR VSGETRLVEG LLQRDPAAAV ARVQALIDLA PEGHRADLRT WMGEIQDRAA
QPQEALRTWM ALQADQAPQR LPLPPQAKAP PSWPDKGDID GDATSAPIFL WGAPGSGVER
VATGLAAASP VLRSDRYTNT PPDDAFQNYH TLQDLASGVL TPERLVERWR EQLPARGLQN
DTVIDWLLWW DNALLWALRP QLPQGRLLLV LRDPRDMLLD WVAYGAAAPL AMTSLAEAGE
WLARALTQVA TLHEEDLYPH VLLRIDHIGN DPQAMAELLG RLFERPMPPA AQLGAPRLPP
GHWRNYRDVM SAAFALLTPI AVRLGYPEE
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