Gene Smal_0079 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_0079 
Symbol 
ID6477628 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp94311 
End bp95333 
Gene Length1023 bp 
Protein Length340 aa 
Translation table11 
GC content69% 
IMG OID642729212 
Producthypothetical protein 
Protein accessionYP_002026467 
Protein GI194363857 
COG category[L] Replication, recombination and repair 
COG ID[COG3359] Predicted exonuclease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.418653 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCCTGA GCCTGGACAA GCTGCGCCTG CTGCGGAAGC AGGCCGGTGA CCCGAAAGCA 
GTCACGCCGG CTGCGCCCGA GCCGCCGCCC GCAGCGCCGG CACCGGTTGC CGCCAACGAT
GCGCGGCAAC CACCGGCCGA GCGTTCGGTG TTCGCCTGGG TCGAACAGGA AATCCGCCAC
AAGGCGACTG GCGCAGCGGC CTCCACACCG ACACCCGCAC CGCTACGTCG GCCGGAAGTG
GGTAGCCTGC ATCGCCTGCT CGGCCTGCGC ACGCGAGGCG GCCCTGCACC TGCACGGGCC
AGCGCGCAGG ATCGCCAGCT GCCTGGCGAG GAAATCGCAC CGGGCCTGTT CCTGATCGAA
TCGCTGCAGC CGCAGCCCAT TCCGGCGCAG TCGATGTCGC TGGATTTCGC CCGCCGCGAA
GGCGAACACG TGGCTCCACG CGACCTGCTG TTCTTCGATA CCGAGACCAC CGGCCTGGCC
GGCGGCACCG GCACCCGTGC CTTCATGATC GGCGCGGCCG ACTGGCATGT GTGCCCGCAA
CGCGGCGAAG GCCTGCGCAT CCGCCAATTG TTGATGTCGA CGATGGCCGC CGAGGACGCG
ATGCTGGCCA CCTTCGCCAG CTGGCTGCAG CCGTCCACCG TGTTCTGCAG CTACAACGGC
CGCAGCTACG ATGCACCCCT GTTGAAGGCG CGCTACCGAC TGGCCCGCCA GCGTTGCCCG
ATTACAGCGC TGGATCACGT CGACCTGCTC TATCCGACCC GCCGCCGCTA TCGCGGCACG
TGGGAGAACT GCAAGCTGTC CACCATCGAA CGCCAGCTGC TGCGCGTGGT GCGCGAGGAT
GACCTGCCCG GCTCGGAAGC GCCCGGCGCA TGGCTGCGTT TCCTGCGCGG CGGCGACGCG
GTGAACCTGC GCCGGGTGGC CGACCACAAC CACCAGGACG TGGTGACCCT GGCCCTGCTG
CTGCAGCGGC TGGTACGGGA AGAACAACGT GAACGCGAAA CCCTGGCGCT GGTCGGGCAG
TAG
 
Protein sequence
MSLSLDKLRL LRKQAGDPKA VTPAAPEPPP AAPAPVAAND ARQPPAERSV FAWVEQEIRH 
KATGAAASTP TPAPLRRPEV GSLHRLLGLR TRGGPAPARA SAQDRQLPGE EIAPGLFLIE
SLQPQPIPAQ SMSLDFARRE GEHVAPRDLL FFDTETTGLA GGTGTRAFMI GAADWHVCPQ
RGEGLRIRQL LMSTMAAEDA MLATFASWLQ PSTVFCSYNG RSYDAPLLKA RYRLARQRCP
ITALDHVDLL YPTRRRYRGT WENCKLSTIE RQLLRVVRED DLPGSEAPGA WLRFLRGGDA
VNLRRVADHN HQDVVTLALL LQRLVREEQR ERETLALVGQ