Gene Smal_0075 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_0075 
Symbol 
ID6477624 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp89089 
End bp91344 
Gene Length2256 bp 
Protein Length751 aa 
Translation table11 
GC content67% 
IMG OID642729208 
ProductTonB-dependent receptor 
Protein accessionYP_002026463 
Protein GI194363853 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1629] Outer membrane receptor proteins, mostly Fe transport 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.612436 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.5792 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGCATA CCGCAGCAAC CCTTCCGCTG GCGATGCTGG CGTTGGCCAT CAGTGGCCAG 
CTGGCGGCGC AGAATACGTC CGCTACGGCT GGCACCCGGC AACTGGATGC GGTGAGTGTC
ACCGCCGTGC GAGGCGCACG CAGCGTGGCC GAGATCGCCG GCACCGTGTA TGCCATCGAG
CGCGAGCAGA TTGCCCCGCA GATCACCGCC GGGCGCAGCA CCGCCGACAT CCTCGGCCAG
CTGGTGCCGT CGCTGGCGCC GGCCAGTGGG ACCACCAGCA ACTACGGCAT GACCATGCGT
GGCCGCAGCG TGCAGGTGAT GATCGATGGC GTGCCATTGA CCGGCGCACG CGATGGGTCG
CGCCAGCTCA ACAGCATCTC GCCGACCATG ATCGAGCGCA TCGAGGTGAT CTCCGGCGCC
ACCGCGCTGT ATGGCGCCGG TGCCAGTGGC GGCATCATCA ACATCATCAC CCTGCAGCCC
GGTGAGCAGC CGGTGCAGCT GGCCAGCCAG TTCGGCCTGC GCAGCCCCTC GCATCTGTCC
AGTGACACGC TGGCCTGGAA CGCCGCGCAG ACCATGACCG TGCGCGGCGA TCAGTTCAGT
GGCGCGTTCG GCTTCGCCTA TGGCCGGCAG GGCGCATCGC TGGATGCGCA TGGCCGCCGT
ATCGGCCCGG AGATCGCGCA GACTGATCGG CAGGACACCG AGACCCGCGA ACTCAATGCG
CGCTTCGATT GGACGCTGAC GGACAGCCAG CGGTTGAGCG TCGGCGTACG CTGGTTCGAC
GATCAACAGG ACAGTGATCA CGGCCCCGAC TATGGCCCGC GCCTGGCCGC GCTGTTCAAC
CCTGCATTCA CGCCCAGCCA CCAGGCGCTG CCCGGCCTGC AGCTGGAGGC GCAGCCGCGT
ACCCGGCACC AGGGAGTGAA TGCGCAGTAC CGCAACCGCG ATGTACTGGG CGGGCAGGAA
CTGAGCGTGG AAGCCTATTA CCGCAACGAG CAGGGACGCT GGTTCCCGTC GGTGTCGACC
CTGGTGCATC CGGCACTGCG CGGGGGCTTC GCCTATGTGG CGATGCAGTC CAACACCGAA
ATCGACGTTT GGGGCCTGCG CAGCGCGCTG CACAAGGATT TCCAAGTTGG TGGCCGCAGC
CTGCAGCTGT CATACGGTGT GGACCACGAG CGCGAGCAGG ACAGCCAGCG CGGACAGATG
TATGACATCA ACCGCTTCAT CGCCAGCAAT GGTCTGGATT ACCGACCGAC AGCGCAGTAC
GCGATGGGGC CGGACGTGCG CGTGGACACC ACCGGACTGT TCCTGCAGGC CGACCATTCG
CTCGGCGAGC GCTTCAGCGT GCAGGCCGGC GTGCGCCACC AGATCCTGCG CAACCGCGTC
GAGGATTCAC TTCCCTACAC CGAAGCGATC ACCGCCGACG CCGTTGCGGG GTACACGCCG
CGCCTGCTGC AGGGTGGCCG CGTGCGCCAC GCGCAGACCC TGTTCAATGC CGGCGTGGTG
TACCGGCTGG ACGCATCGCA ACAGCTTTTC GCGAACTTCT CGCAGGGATT CAGCCTGCCC
GATACGCAGC GCATGCTGCG CGATGTGCCG GCGAGCTTCG TCATCGACAG CCGCAACGTC
GGCCCGATCA AGGTCGACAG CTATGAGCTG GGCTGGCGCC GCAGCGATGC ATCGCTGCAG
AGCGCGGTGA CCGCGTTCTA CAACCGCTCG GACAAGACCG TGCAGTTCAA CCGTGACTAC
AGCGTGTCGG TGGCCGACAC CGATGAGCGC GTGTGGGGCG TGGAGGCCAA CCTGCGCTAC
ACGCCGACGG CGCAGCTGGA GCTGGGCGCC AGCCTTGCCA GCACCCGGGG CCAGTACCGC
GATGCTGCCG GACGTTGGCG TGAGCTCAAT GCGTTCCGCG TTTCACCCTT GAAGGCTGGT
GTGCATGGGC AGTGGCGCTT CGCCAATGAC AGCCTGCTGC GCTTGCAGGG ACAAGTGGTG
GGCGGGACCG ATCGTGCCTG GCGCGATGCG CCACTCGCAG CGATCAGTCC CAGCATTCGC
GCCACCCCGG CGGCGAAGAT CCACGGCTAT GCGGTGTTCG ACCTGATCGG CGAAGTACCA
CTGGCAGGCG GCCGCTTCAG CGCGGGCATC TACAACCTGG CCGATCGTGA CTACCGCACG
GTCTATGGCC AGCAGGCCGA GGCGACCTAC GGAAAGATGT CCAGTCTGCC GGCGGCAGGG
CGGACCTTCT CGATCGGGTA CCGGGTGGAG TACTGA
 
Protein sequence
MRHTAATLPL AMLALAISGQ LAAQNTSATA GTRQLDAVSV TAVRGARSVA EIAGTVYAIE 
REQIAPQITA GRSTADILGQ LVPSLAPASG TTSNYGMTMR GRSVQVMIDG VPLTGARDGS
RQLNSISPTM IERIEVISGA TALYGAGASG GIINIITLQP GEQPVQLASQ FGLRSPSHLS
SDTLAWNAAQ TMTVRGDQFS GAFGFAYGRQ GASLDAHGRR IGPEIAQTDR QDTETRELNA
RFDWTLTDSQ RLSVGVRWFD DQQDSDHGPD YGPRLAALFN PAFTPSHQAL PGLQLEAQPR
TRHQGVNAQY RNRDVLGGQE LSVEAYYRNE QGRWFPSVST LVHPALRGGF AYVAMQSNTE
IDVWGLRSAL HKDFQVGGRS LQLSYGVDHE REQDSQRGQM YDINRFIASN GLDYRPTAQY
AMGPDVRVDT TGLFLQADHS LGERFSVQAG VRHQILRNRV EDSLPYTEAI TADAVAGYTP
RLLQGGRVRH AQTLFNAGVV YRLDASQQLF ANFSQGFSLP DTQRMLRDVP ASFVIDSRNV
GPIKVDSYEL GWRRSDASLQ SAVTAFYNRS DKTVQFNRDY SVSVADTDER VWGVEANLRY
TPTAQLELGA SLASTRGQYR DAAGRWRELN AFRVSPLKAG VHGQWRFAND SLLRLQGQVV
GGTDRAWRDA PLAAISPSIR ATPAAKIHGY AVFDLIGEVP LAGGRFSAGI YNLADRDYRT
VYGQQAEATY GKMSSLPAAG RTFSIGYRVE Y