Gene Smal_0071 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_0071 
Symbol 
ID6477620 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp85128 
End bp86249 
Gene Length1122 bp 
Protein Length373 aa 
Translation table11 
GC content67% 
IMG OID642729204 
Productbeta-lactamase 
Protein accessionYP_002026459 
Protein GI194363849 
COG category[V] Defense mechanisms 
COG ID[COG1680] Beta-lactamase class C and other penicillin binding proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.902729 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.844307 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCATCA CTGCCCTGCC CTTCGCCGCC GTCTCTGCCA GCCAGGATCA GGCCAACGAC 
CAGACCCGCC GGCTGATCCG CCAGATCATG CTGGAGCAGC GCATCCCGGG ATTGCAGATT
GCGGTGGTCA AGGACGGGCA GATCGTGTTG TCCGAGGCCT ACGGTCTGGC CAATGTCGAG
AACGGTGTGC TTGCCTCGCG CGACACCCGC TTTCCGCTCA ATTCGGCCAT CAAGGCGTTC
ACCGGCGTGG CCGCCGCGCA GCTGGCCCAG CAGGGGCAGC TGGATCTGGA CGCGCCGGCC
TCGCGTTACC TGGATGATCT TCCGGCAGCG TGGAGAGACG TACGCGTACG CCAGTTGCTT
GCGCATACCT CAGGCCTTCC GGACATCCTC GATGCGAGCG GACTGCTGGG CGGTGGTACC
GAAGCCCAAG CGTGGGCGGC GGTCACTGCG CTGCCGATGG AGGCGGCCTC CGGCCAGCGC
TTCGCATACA ACCAGACCAA CTACGTACTG CTGGCGCGGA TCATCGCGCA GCAATCGGGC
ATGCCGTACG CGCACTTCCT GGCGACCGGC CAGTTCAGCA GCGCGCGCAT GGCGCGCACC
ACCTTTGGCG ACAGCTACGA TCTGATTCCG CAGATGGCAA CGATGTACAG CCTGGCCCCG
CGTGCAACCG ACGCAGCCGA TGCACCGCCG CGCCTGTCGC ACTGGTTCTA CGACATTCCG
CCTTCACTGT GGGCCGGTGG TGGCATCCTC ACCACCGCCG ATGACACCGC GCGTTGGCTG
GTCGCGCTGA CCGACGGGCG CCTGCTTCAG GATGCACCGC GGAAGAGGAT GTGGACCGCA
GAGCGCCTCA CCGATGGCCG TGCCGGCCCA TGGGCGGGCG GCTGGCCGGT GCTGCGTGCA
TCGCCCGACC TTCAGGTGGC CGGTATCGGC GGTGCGCGCT CGGCCTTCGT GGTCTATCCC
GACCGCGACG TCGCGGTGGT GGTGCTGACC AATCTGGTCG GCGCCAATCC ACAGCAGTCC
ATTCCGCGCA TTGCCGATTT CTATGCGCGC GCGGCCTCAA CGCCCGCTCA CGAACGGGTC
GCCCTTGCAC GGCAGCAACG GGCTGTCATC GCAGGGCCAT AG
 
Protein sequence
MLITALPFAA VSASQDQAND QTRRLIRQIM LEQRIPGLQI AVVKDGQIVL SEAYGLANVE 
NGVLASRDTR FPLNSAIKAF TGVAAAQLAQ QGQLDLDAPA SRYLDDLPAA WRDVRVRQLL
AHTSGLPDIL DASGLLGGGT EAQAWAAVTA LPMEAASGQR FAYNQTNYVL LARIIAQQSG
MPYAHFLATG QFSSARMART TFGDSYDLIP QMATMYSLAP RATDAADAPP RLSHWFYDIP
PSLWAGGGIL TTADDTARWL VALTDGRLLQ DAPRKRMWTA ERLTDGRAGP WAGGWPVLRA
SPDLQVAGIG GARSAFVVYP DRDVAVVVLT NLVGANPQQS IPRIADFYAR AASTPAHERV
ALARQQRAVI AGP