Gene Smal_0062 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_0062 
Symbol 
ID6477611 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp71106 
End bp73529 
Gene Length2424 bp 
Protein Length807 aa 
Translation table11 
GC content70% 
IMG OID642729195 
Productmulti-sensor hybrid histidine kinase 
Protein accessionYP_002026450 
Protein GI194363840 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGGACGT CCACCGTGAA TGCCGCCGGC CTCCCTGCAG CTGTTGCTGT CATGGCCTGC 
CTGATGCTGC CCGCAACCGC GTCCGCCGCT GGCTGCGAGA CACCGCTGCG CATTGCCTGG
CCTTCCGATC GGGCGCCATT GTCGTCCGCG ATCGAGGGGC AGGCCGAAGG GGTCAGCGCG
GCCTACCTGA ACCTGCTGGG CGAACAACGG CCGCTGCAGG CGCAACCGCT GCCGGCCACG
GCGGTCGTCG AAGGCCTGTT GCCGCCCGCC ACCCAGGCGT TGCTGGGCTG GCCGCGCTCG
CAGCTGCCTT CCGGCTGGGT GGCCAGTGCA CCGTACCTGC AGCTGCCGCA GGTGATCGTG
CGCCGCGCCG ATGCGCGGCC GGTGCTGGGC CTGGAAGACC TGCGCGAGCG CGCGGTGGCC
AGTCCCGACC GGCTGCCGTT GGCCGCGCTG CTGGCCGAGC AGGCTCCGGG TGCACAGCTG
CTGCCGCCGG CGCCGTTGGA TGATGCGCTG TCGCTGCTGG GCACCGGTCT GGTCGACGCG
GTGATCGCCA ACCTCGGCGA GGTCGAGGCC GGGCTGCGCC GGTACCAGGG CGATCGGCTG
GTGATTGCCG CGCCAGCCGG GTTCGACGAT GCGCTTGTGC TGGCCACCGT ACCGGCCTGT
GCCGGCGTCA TTCCCGGCTT CGAGCAGGCC GTGTCGCAGC TGACCGACAC GCAGCGCGAC
GTGATCCGCA CGGGATGGCT GCCGGACCAG CCACGCAACC CGCCGTCCTC ATCGCCCCTG
CGTTGGCTGG TACCGGCCTC GCTGATCCTG CTGGCGCTGG CGCTGGTCTA CGCCTTCGGC
TATTGGCGCG TGCACCGCGA AAGCGCAAGG CGTCGCGTGG CCGCGCAGCG CCTGCAGGAA
GTGACCGCGA ACCTGCCGGC GGTGGTCTAC CAGGCGCGCC GCACCGCTAC CGGGGACTAC
AGCTTTCCGC AGATTGCCGG CGATGTGCAG GCGCTGTTCG GGGTGAGCGT GGAGACCGCG
CGGATCGACC ACCCGCGGCT GCTGGCCGCG GTCCATCCCG ATGACCGGAC TCTGGTGATG
GACTGTGTCG AAGCGGCCGC ATTGGCCCGT GGACCGATCG ACGTCACCTT CCGTACGCGC
TCGCCACAGG GCTGGCGCTG GGTGCATTCG CAGGGCCGCA CGCTGGCGTG CGATGACAGC
AACGTTGAGT GGAGCGGCTA CTGGATGGAT GTCAGCGAGG TACACACACG TACCCAGGCG
CTTGCAGATG CAAGGCGCGA GGCCGAGCAG GCCGCGCTGG CCAAGACCCA CTTCCTGGCG
ACGATGAGTC ACGAGATCCG CACGCCGATG AGCACGCTGC TGGGCATGCT CGAACGATTG
GCCGCCAGCG ATCTGGACCA CCGCCAGCAA CAGGTGCTGG CCACCATCGG CGACGCCGCG
CAGATGCTGC GGCAGATCCT TGACGATGTG CTGCACAGCC AGCGCCTGCA GCCTGCGCCA
CTGCAGCGGC AGCCTACCGA CCTGGCCGCG CTGCTGCGGG CAGTGCAGCA GCTGCTGCTG
CCGGTGGCTG CCAGCCGTGG CCTGTACCTG CAGATCCATC TCGATCCTGC ACTGCAGGCC
GGGTCGCTGG CCGACAGCCT GCGGCTGCGC CAGATCCTGT TCAACCTGGT CGGCAATGCG
CTCAAGTTCA CCCTGCATGG CGGGGTGGAA CTACGGGTGC AGGTGCTGCA GCAGCACGCA
CAGGGGCAGC GGTTGCGCCT GCAGGTAAGC GATAGCGGTG TGGGCATCAG TGCGGAACGG
CAGCAGGCGG TGTTTGGCGC CTACACCCAG GCCGAGGCTT CGACCACGCG CCGCTTCGGC
GGCAGTGGAC TGGGCCTGGC AATCTGCCGT GAGCTGGCCG TGTCGATGGG GGGAGACCTG
CAGCTGCACA GTGCGACCGG CGAGGGCACC ACGGTATGGC TGGAGCTGGA CCTGAGTGCC
TGCGAGTTGC CTGCTGGCGC GCCGTCACCT GCGATCGCCG AGGAACAGCC ACTGCCACCG
GCACGGGTGC TGGTGGCCGA AGACCATCCC ACCAACCTGC AGCTGTTGGA GCAGCGCCTG
CACGACCTGG GGCTGCAGGT GCATGCCTGC GCCGATGGAG CGCAGGCCCT GCAGGCCTGG
CAGTCGCAGC CATTTGAACT GGTGATCACC GACTGCCACA TGCCGGGCAT GAATGGCTTC
GCGCTGGCAC GGGCGATCCG TGCAGACACC TGCCAGCACC GCGCGCGGGT ACCGATCATC
GCGCTCACCG CCAGCGTGCT GGAACGCACC CGCGAGGCTT GCCGCGACGC CGGCATCGAT
CACTTCCTGG CCAAGCCGGT GGAGCCGCGC GAACTGCGTG CATTGCTGGC GGTGCTGCTG
GCGCCGGATT CAGTGCGCCA GTAG
 
Protein sequence
MRTSTVNAAG LPAAVAVMAC LMLPATASAA GCETPLRIAW PSDRAPLSSA IEGQAEGVSA 
AYLNLLGEQR PLQAQPLPAT AVVEGLLPPA TQALLGWPRS QLPSGWVASA PYLQLPQVIV
RRADARPVLG LEDLRERAVA SPDRLPLAAL LAEQAPGAQL LPPAPLDDAL SLLGTGLVDA
VIANLGEVEA GLRRYQGDRL VIAAPAGFDD ALVLATVPAC AGVIPGFEQA VSQLTDTQRD
VIRTGWLPDQ PRNPPSSSPL RWLVPASLIL LALALVYAFG YWRVHRESAR RRVAAQRLQE
VTANLPAVVY QARRTATGDY SFPQIAGDVQ ALFGVSVETA RIDHPRLLAA VHPDDRTLVM
DCVEAAALAR GPIDVTFRTR SPQGWRWVHS QGRTLACDDS NVEWSGYWMD VSEVHTRTQA
LADARREAEQ AALAKTHFLA TMSHEIRTPM STLLGMLERL AASDLDHRQQ QVLATIGDAA
QMLRQILDDV LHSQRLQPAP LQRQPTDLAA LLRAVQQLLL PVAASRGLYL QIHLDPALQA
GSLADSLRLR QILFNLVGNA LKFTLHGGVE LRVQVLQQHA QGQRLRLQVS DSGVGISAER
QQAVFGAYTQ AEASTTRRFG GSGLGLAICR ELAVSMGGDL QLHSATGEGT TVWLELDLSA
CELPAGAPSP AIAEEQPLPP ARVLVAEDHP TNLQLLEQRL HDLGLQVHAC ADGAQALQAW
QSQPFELVIT DCHMPGMNGF ALARAIRADT CQHRARVPII ALTASVLERT REACRDAGID
HFLAKPVEPR ELRALLAVLL APDSVRQ