Gene Smal_0056 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_0056 
Symbol 
ID6477605 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp64096 
End bp66732 
Gene Length2637 bp 
Protein Length878 aa 
Translation table11 
GC content67% 
IMG OID642729189 
Productglycerol-3-phosphate acyltransferase 
Protein accessionYP_002026444 
Protein GI194363834 
COG category[I] Lipid transport and metabolism 
COG ID[COG2937] Glycerol-3-phosphate O-acyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.753755 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGCCGA TGTCGAAACA GAACCCGCTG CCGTTCCCCG GCGAAGAATC CCAGTCGACG 
CCCGCCGATA CGGCGCCGGC GTCCCCCTCG ACCGGTACCG GCCCGAATCC GGTACCGCCG
CCGGCGCATG CGCGGCCGGC CGGCCGTCGG CCGCTGTGGG CGCGCCTGCT CGGCCGCCTG
GTCGAGCCGT GGCTGTCGCT GAAGATCGAG CCGGAGGATC CGGGCCAGTA CAACGATGGC
CGCCCGGTGA TGTACGTGCT GGAAGACTAC GGCCTGTCCA ATGCGCTGAT CCTGGACAAG
GCCTGCCGCC AGGCCGGACT GCCGTCGCCG CTCGTGCCGC TGGCCGGTGA CCCGACCGGG
CGCAAGCGCG CCTATCTGGC GCTGTCGCGG CGCAGTTCCA GCAATTCGCT GATCCCCGAG
CAGCGCGGCG CCAAGACCCA TTCCGATTCG CTGGCCAAGG TCCTGCAGGC GCATCGCGTG
CGCGATGACC TGGACGTGCA CCTGGTGCCG GTGTCGATCT TCGTCGGCCG CGCGCCGGAC
AAGCAGAGCG GCTGGTTCGC CGTGCTGTTC TCGGAAAACT GGGCGCTGGT GGGTCGCTTC
CGCCGCCTGC TGGCGGTGCT GCTCAACGGC CGCAGCACCA TCGTCCGCTT CGCCCCGCCG
ATCTCGCTGC GCAGCACCGT GGACGAAGGC CTGGAGCCGG AGCGTACGGT GCGCAAGCTG
CAGCGCGTGC TGCGTACCCA TTTCCGCCGC ATCCGTGAAT CGGTGATCGG CCCCGACCTG
TCTACCCGGC GCCTGCTGGT CGATCAGGTA CTGGCCGCCG AACCGGTGCG CGAAGCGATC
GCCGCGCAGG CCAAGCGCGA CAATTCGAAG CCGGCCGATG CCTGGAAGAA GGCGCATGCC
TACGCCTGGG AAATCGCCGC GGACTATTCC AGCCCGGTGG TGCGCTCGGC CAGCTTCATG
CTCAGCCATG TGTGGAACCG CATCTATGCG GGCGTGCTGG TGCACCACCT GGACAAGTTC
AAGGCCGCCG CGCCGGGCCA CGAAGTGGTC TACGTGCCCA GCCACCGCAG CCACATGGAC
TACCTGCTGC TGTCCTACCT GCTGTACGAC CGTGGCATCG TGCCGCCGCA CATCGTGGCC
GGCATCAACC TGAACCTGCC GGTGGTCGGC ACCCTGCTGC GCAAGGGCGG CGCGTTCTTC
ATCCGTCGCT CGATCCGTGG CAACGCACTG TACTCGGCGG TGCTCAGCGA GTACGTCGCG
CAGCTGGTGG CCGGCGGCTA CTCGCTGGAG TACTTCGTCG AGGGCGGCCG CTCGCGTACC
GGCCGCCTGC TGCAGCCCAA GGGCGGCATG ATCTCGATGA CGCTGCGCGC GTTCCTGCGC
CAGCCACGCA AGCCGGTGCT GTTCCAGCCC ATCTACATCG GCTATGAGAA GCTGATGGAA
GGCGGCAGCT ACCTGGATGA ACTGTCCGGG CGGCCGAAGG AAAAGGAATC GATCTGGTCG
CTGCTGTGGG GCATCCCCAA GGTGCTCAAG CAGAACTACG GCCAGGTGGT GGTGAACTTC
GGTGAGCCGA TCGCGCTGAA CGACGTGCTG GCCGAGAAGG CCCCGGAGTG GGGCGGCGAA
GCGGTGTCCG AGGATGAGAA GCCGTCCTGG CTGTCGACCA CCGTCGATAC GCTGGCCGAG
CGCATCCAGG TACGCATCAA TGGTGCCGCC GACGTCAATC CGATCAACCT GCTGGCGCTG
GCTCTGCTGT CCACGCCGAA GCACGCGATG GGCGAGGCCG ACCTGATCGC ACAGATCGAG
CTGTGCAAGA CCCTGCTGGT GGAAATGCCG TACTCGGGCC GGGTGACGGT GACCCCGCAT
TCGCCGGAGC GGATCATCGC CCACGCTGAG GAAATCAACG TCCTCACCCG CATCAAGCAC
CCGCTGGGCG ACGTGCTCAG CGTCAGTGGC GACACCGCGG TGCTGCTCAG CTACTTCCGC
AACAACGTGG TGCACCTGTT CACCGCATCG TCGTGGGTGG CCTGCTGCTT CCAGAACAAC
CGCCGCATGA GCCGCACCGG CCTGGTCCAG CTGGGCCGCA CGGTGTACCC GTTCCTGCAG
GCCGAACTGT TCCTGCCATG GACCGAGGAC GAGTTCGCCC AGCGCATCGA CCAGACCATC
GACGTGTTCG TGCGCGAAGG GTTGCTGCAG AACGTCAACG AAGACGACGG CGGCATCCTT
GCCCGCAACA CCGGGCAGAC CGATGAAGTG TTCCGCCTGC GGGCCATCGG CCACTCGCTG
CAGCAGGCCT TCGAGCGCTA TTACATCGCC ATCTCGGTGC TGGTGAAGAA CGGCCCCGGC
GTGCTGGGTG CGGCCGAACT GGAAAGCCTG TGCCAGCAGG CCGCGCAGCG GCTCAGCCTG
CTCTACGCAC CGGCGGCGCC GGAGTTCTTC GACAAGTCGC TGTTCCGCGG CTTCATCCAG
AAGCTGCGCG AGCTGCGCCT GGTATGGCCG GACGAGAACA GCAAGCTGCT GTTCGACGAA
CGCCTGGATG CCTGGGCCAA GGATGCCAAG TTCATCCTCG GCCGCGAGCT GCGCCACACC
ATCGAACGGG TCAGCCCGGA AGCGGCACGC CCGGACGAGC CTGCGCCGCA GGATTGA
 
Protein sequence
MAPMSKQNPL PFPGEESQST PADTAPASPS TGTGPNPVPP PAHARPAGRR PLWARLLGRL 
VEPWLSLKIE PEDPGQYNDG RPVMYVLEDY GLSNALILDK ACRQAGLPSP LVPLAGDPTG
RKRAYLALSR RSSSNSLIPE QRGAKTHSDS LAKVLQAHRV RDDLDVHLVP VSIFVGRAPD
KQSGWFAVLF SENWALVGRF RRLLAVLLNG RSTIVRFAPP ISLRSTVDEG LEPERTVRKL
QRVLRTHFRR IRESVIGPDL STRRLLVDQV LAAEPVREAI AAQAKRDNSK PADAWKKAHA
YAWEIAADYS SPVVRSASFM LSHVWNRIYA GVLVHHLDKF KAAAPGHEVV YVPSHRSHMD
YLLLSYLLYD RGIVPPHIVA GINLNLPVVG TLLRKGGAFF IRRSIRGNAL YSAVLSEYVA
QLVAGGYSLE YFVEGGRSRT GRLLQPKGGM ISMTLRAFLR QPRKPVLFQP IYIGYEKLME
GGSYLDELSG RPKEKESIWS LLWGIPKVLK QNYGQVVVNF GEPIALNDVL AEKAPEWGGE
AVSEDEKPSW LSTTVDTLAE RIQVRINGAA DVNPINLLAL ALLSTPKHAM GEADLIAQIE
LCKTLLVEMP YSGRVTVTPH SPERIIAHAE EINVLTRIKH PLGDVLSVSG DTAVLLSYFR
NNVVHLFTAS SWVACCFQNN RRMSRTGLVQ LGRTVYPFLQ AELFLPWTED EFAQRIDQTI
DVFVREGLLQ NVNEDDGGIL ARNTGQTDEV FRLRAIGHSL QQAFERYYIA ISVLVKNGPG
VLGAAELESL CQQAAQRLSL LYAPAAPEFF DKSLFRGFIQ KLRELRLVWP DENSKLLFDE
RLDAWAKDAK FILGRELRHT IERVSPEAAR PDEPAPQD