Gene Smal_0040 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_0040 
Symbol 
ID6477516 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp47282 
End bp48484 
Gene Length1203 bp 
Protein Length400 aa 
Translation table11 
GC content72% 
IMG OID642729173 
Producthypothetical protein 
Protein accessionYP_002026428 
Protein GI194363818 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.13813 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.00125865 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACGATCC ATTCCACCTT GCTGGCCAGC GCTGTGCTGG CAGTGCTGTC CCTGTCCACA 
GCGCACGCCG CGCAGCCGCT GCAGGCCGCC CGTGCGGGCG ATCAGGTGCC CGTCGCCCTA
GTGGCCGCGC CGCTTCCCGC CGATGAGAGC GAACACGCGC CACTGGCCTT TGCCTGGGCG
CTGGACCCGG CACAGCCGCT GCAGGCGGCC ACGCCGTATG CCTCGGTCAG TCGCAGCTAC
TGGCAGCAGG TTGATGGCAC GCAGCTGCAA CGCGGCCTGG ACCTGCCACT GACGGCGCCG
GACGCGGTGA TCCAGCTGAG CCCGGCCGAC GGTGCCCGCG CGCTGCCGGC CAACACGCTG
CAGGTGCGCG ACCCGGCCGG CCGCAGCAGC GTGGCGCGCA GTGTCGATGC GCGCGCGCTG
CAGGATGCCG GCATGCCGGT GAGCGATGGC AGCAGCATGC TGCGTACCGG CGCGACCAGT
GCGGTCGGTG CGTACACGCT GCAGAGCGCG CAGGCCCAAG GCCGCTACGT GGTGCAGGTG
CTGGAGCCGA ACAGCCCGCT GCGCCTGGAG GTGCAGGCCA ACCAGGCGCA GGTGCTGGCC
GGCGGCAACG TGCAGCTGCA GGCACGCCTG CTGGAAGACG GCGCCACCAC CGCGCAGCTG
GCATCGCGTC GTGGTGGGCT GGGCGGTGAA GCCCTGCTGG TCGCACCGGA TGGCCGCAGC
TGGCCGCAGC GGTTGCTGCG CACCACCGAT GGTGCGCTGC GCGCGCAGGT AAGGATCCCG
GCCGATGTCG GAACCGTGCA GGGGCTGTGG GAATTGCAGG TGTTCGCCCA GGCCGACGGT
GTGCTGCGCG ATGGCAAGGT GGCCTTTGCG GTGGCACGGG CGACTGCCCG TTTCAGTGGC
CAGGCCGCAC CGGATCCGGC CAGTCGCCAG GTGGCGCTGC CACTGCAGGT GGCCGCCGCC
GGCCGCTATG AGGCGCGAGG CACGCTGTAC GCCACGGCCC GCGATGGCCA GCTGAAGCCG
GTGGCACAGG CACATGCGGC CGCGTGGTTC GATGGCCCGG GCGCAGGCCA GCTGGTGCTG
CCGTTCGACC AGGCGGCGTT GCCGGCCGGA TTCGGTGCGC CGTACGAACT GCGCGACCTG
CAGCTGCAGG ATCAGAGCCG GATGGCACCG ATCGAGTCGC GCGCGCTGGC ATTGCGGTTC
TGA
 
Protein sequence
MTIHSTLLAS AVLAVLSLST AHAAQPLQAA RAGDQVPVAL VAAPLPADES EHAPLAFAWA 
LDPAQPLQAA TPYASVSRSY WQQVDGTQLQ RGLDLPLTAP DAVIQLSPAD GARALPANTL
QVRDPAGRSS VARSVDARAL QDAGMPVSDG SSMLRTGATS AVGAYTLQSA QAQGRYVVQV
LEPNSPLRLE VQANQAQVLA GGNVQLQARL LEDGATTAQL ASRRGGLGGE ALLVAPDGRS
WPQRLLRTTD GALRAQVRIP ADVGTVQGLW ELQVFAQADG VLRDGKVAFA VARATARFSG
QAAPDPASRQ VALPLQVAAA GRYEARGTLY ATARDGQLKP VAQAHAAAWF DGPGAGQLVL
PFDQAALPAG FGAPYELRDL QLQDQSRMAP IESRALALRF