Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smal_0040 |
Symbol | |
ID | 6477516 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stenotrophomonas maltophilia R551-3 |
Kingdom | Bacteria |
Replicon accession | NC_011071 |
Strand | + |
Start bp | 47282 |
End bp | 48484 |
Gene Length | 1203 bp |
Protein Length | 400 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 642729173 |
Product | hypothetical protein |
Protein accession | YP_002026428 |
Protein GI | 194363818 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.13813 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.00125865 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGACGATCC ATTCCACCTT GCTGGCCAGC GCTGTGCTGG CAGTGCTGTC CCTGTCCACA GCGCACGCCG CGCAGCCGCT GCAGGCCGCC CGTGCGGGCG ATCAGGTGCC CGTCGCCCTA GTGGCCGCGC CGCTTCCCGC CGATGAGAGC GAACACGCGC CACTGGCCTT TGCCTGGGCG CTGGACCCGG CACAGCCGCT GCAGGCGGCC ACGCCGTATG CCTCGGTCAG TCGCAGCTAC TGGCAGCAGG TTGATGGCAC GCAGCTGCAA CGCGGCCTGG ACCTGCCACT GACGGCGCCG GACGCGGTGA TCCAGCTGAG CCCGGCCGAC GGTGCCCGCG CGCTGCCGGC CAACACGCTG CAGGTGCGCG ACCCGGCCGG CCGCAGCAGC GTGGCGCGCA GTGTCGATGC GCGCGCGCTG CAGGATGCCG GCATGCCGGT GAGCGATGGC AGCAGCATGC TGCGTACCGG CGCGACCAGT GCGGTCGGTG CGTACACGCT GCAGAGCGCG CAGGCCCAAG GCCGCTACGT GGTGCAGGTG CTGGAGCCGA ACAGCCCGCT GCGCCTGGAG GTGCAGGCCA ACCAGGCGCA GGTGCTGGCC GGCGGCAACG TGCAGCTGCA GGCACGCCTG CTGGAAGACG GCGCCACCAC CGCGCAGCTG GCATCGCGTC GTGGTGGGCT GGGCGGTGAA GCCCTGCTGG TCGCACCGGA TGGCCGCAGC TGGCCGCAGC GGTTGCTGCG CACCACCGAT GGTGCGCTGC GCGCGCAGGT AAGGATCCCG GCCGATGTCG GAACCGTGCA GGGGCTGTGG GAATTGCAGG TGTTCGCCCA GGCCGACGGT GTGCTGCGCG ATGGCAAGGT GGCCTTTGCG GTGGCACGGG CGACTGCCCG TTTCAGTGGC CAGGCCGCAC CGGATCCGGC CAGTCGCCAG GTGGCGCTGC CACTGCAGGT GGCCGCCGCC GGCCGCTATG AGGCGCGAGG CACGCTGTAC GCCACGGCCC GCGATGGCCA GCTGAAGCCG GTGGCACAGG CACATGCGGC CGCGTGGTTC GATGGCCCGG GCGCAGGCCA GCTGGTGCTG CCGTTCGACC AGGCGGCGTT GCCGGCCGGA TTCGGTGCGC CGTACGAACT GCGCGACCTG CAGCTGCAGG ATCAGAGCCG GATGGCACCG ATCGAGTCGC GCGCGCTGGC ATTGCGGTTC TGA
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Protein sequence | MTIHSTLLAS AVLAVLSLST AHAAQPLQAA RAGDQVPVAL VAAPLPADES EHAPLAFAWA LDPAQPLQAA TPYASVSRSY WQQVDGTQLQ RGLDLPLTAP DAVIQLSPAD GARALPANTL QVRDPAGRSS VARSVDARAL QDAGMPVSDG SSMLRTGATS AVGAYTLQSA QAQGRYVVQV LEPNSPLRLE VQANQAQVLA GGNVQLQARL LEDGATTAQL ASRRGGLGGE ALLVAPDGRS WPQRLLRTTD GALRAQVRIP ADVGTVQGLW ELQVFAQADG VLRDGKVAFA VARATARFSG QAAPDPASRQ VALPLQVAAA GRYEARGTLY ATARDGQLKP VAQAHAAAWF DGPGAGQLVL PFDQAALPAG FGAPYELRDL QLQDQSRMAP IESRALALRF
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