Gene Smal_0028 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_0028 
Symbol 
ID6477504 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp34147 
End bp35175 
Gene Length1029 bp 
Protein Length342 aa 
Translation table11 
GC content67% 
IMG OID642729161 
ProductAlcohol dehydrogenase GroES domain protein 
Protein accessionYP_002026416 
Protein GI194363806 
COG category[R] General function prediction only 
COG ID[COG1064] Zn-dependent alcohol dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.0233433 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000000000133046 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGAATTCGA CCATGAAGGC CGCCGTCGTA CGTGAGTTCG GCAAGCCACT GGTGATCGAG 
GAAGTCTCGG TACCGCGCCC GGGGGCGGGC GAGGTACTGG TCAAGATCGA GGCCTGTGGC
GTCTGCCACA CCGACCTGCA CGCCGCCGAG GGCGACTGGC CGGTGAAACC GAACCCGCCA
TTCATCCCCG GCCACGAGGG CGTGGGGCAC ATCGTGGCCG TGGGAGGCGG GGTAGGGCAC
GTCAAGGAAG GCGACAGGGT CGGCATCCCC TGGTTGTACT CGGCGTGTGG CCATTGCGAA
CACTGCCTGG GTGGCTGGGA AACGCTGTGC GAGACACAGC GCAACACCGG CTACTCGGTC
AACGGCGGCT TCGCCGAGTA CGCACTGGCC GATGCCAACT ATGTCGGCCT GCTTCCGAAG
GAAGTGGGCT TCGTCGAGAT CGCGCCGGTG CTGTGCGCCG GCGTGACCGT CTACAAAGGC
CTGAAGGTTA CCGATACCAA GCCAGGGGAC TGGGTGGTGA TTTCCGGCAT CGGTGGCCTC
GGCCACATGG CGGTGCAGTA CGCCCGCGCG ATGGGCCTGA ACGTGGCTGC GGTGGATGTG
GACGACAGCA AGCTGGCGTT GGCCCGGCAG CTCGGCGCGC AGATCACCGT CAACGCGCGC
ACCACCGACC CCGCCGCCTT CCTGAAGAAG GAAATCGGTG GCGCGCACGG TGCGCTGGTC
ACCGCGGTTT CGCCGAAGGC GTTCGAGCAG GCACTGGGCA TGGTCCGCCG TGGCGGCACC
GTCTCGCTCA ATGGCCTGCC ACCCGGCAAT TTCCCGCTGG ACATCTTCGG CATGGTGCTC
AACGGCATCA CTGTGCGTGG CTCGATCGTC GGCACCCGGC TGGACCTGCA GGAATCGCTG
CAGTTCGCCG CCGAAGGCAA GGTCGCGGCC ACGGTCAGCA CCGACCGCCT GGAGAACATC
AACGACGTGT TCGCGCGCAT GCACGCGGGC ACCATCGAAG GCCGCGTAGT GCTCGACTTC
GCCGCCTGA
 
Protein sequence
MNSTMKAAVV REFGKPLVIE EVSVPRPGAG EVLVKIEACG VCHTDLHAAE GDWPVKPNPP 
FIPGHEGVGH IVAVGGGVGH VKEGDRVGIP WLYSACGHCE HCLGGWETLC ETQRNTGYSV
NGGFAEYALA DANYVGLLPK EVGFVEIAPV LCAGVTVYKG LKVTDTKPGD WVVISGIGGL
GHMAVQYARA MGLNVAAVDV DDSKLALARQ LGAQITVNAR TTDPAAFLKK EIGGAHGALV
TAVSPKAFEQ ALGMVRRGGT VSLNGLPPGN FPLDIFGMVL NGITVRGSIV GTRLDLQESL
QFAAEGKVAA TVSTDRLENI NDVFARMHAG TIEGRVVLDF AA