| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smal_0017 |
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| Symbol | |
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| ID | 6477493 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Stenotrophomonas maltophilia R551-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011071 |
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| Strand | + |
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| Start bp | 20769 |
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| End bp | 22985 |
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| Gene Length | 2217 bp |
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| Protein Length | 738 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 642729150 |
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| Product | YD repeat protein |
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| Protein accession | YP_002026405 |
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| Protein GI | 194363795 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3209] Rhs family protein |
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| TIGRFAM ID | [TIGR01643] YD repeat (two copies) |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.215545 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.000002636 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCCAGCAC TGACGCTTGC CCTGATCGGG CTGAACGCTG TTGTCTCCGT CAACACATAT
GAGTACGACG AACTGGGCCG CGTGATCGTC GAGCGCGGTA ATGGGGTACA GAACGTACGC
TATGCCTATG ACGCGGAGGG ACGCGTCACG CAGGTGACCG ATTCGCAGAA TCGTGTCACC
CGTATGAGCT ACGATCCGCG TGGACGCCTG ATCAAATCAA TCGACGCCGT CGGGGGCACG
ACCCAGATTG CCTACGACCT GGCAGATCGC CCGGTCCGTG TGAGCGATCC CCGCAATCTC
GTTACCACCT ACGAATTCGA TGGTTTCGGC CAGATGTGGA AACAGGTGAG TCCGGATACG
GGAACGACAC AGCACCAGTA CGATGCTGCA GGTCTGCGGA CATCGACGAC GCGGGCCGAT
GGCAGCGTTG TCTCCTTCGG CTACGACGGT CTGGGACGAA TGACTTCTGC GAGCGCAGAA
GGCCGAACAA TGGGTTATAG CTACGATTGG TGCGGCAACG GTAAGGGTCA GATGTGCGGC
ACTTCAGGGC CCGGAACCGC CACCCATTTT GCCTATACAC CGAACGGTCA GCTGCAGATA
CGGCGCGACT TCACCGATCT GTCTGGTCAG AAGACGGACT ACAGCACCAC CTATGGATAC
GACGGCATCA ATCGCCTGAG CCAGATCATC TATCCCAACG GTGACAAGGC GACCTACACA
TATGGCTCCC AAGGAAAACC AAGTGCGTTG ACGGCGACGG TCGACGGGAC TCAGCGTTCA
ATCATTTCCC AGGCCAACTG GAAGGTCACG GGAGCGCATG AGTGGCTGGC CTACGGCAAC
GGACTTGCCC GGGGCTACAA CCACGATCAG GAGGGGCGGC TGACCGCAAT GTCGGTCTGG
GGACCCAATG GCAGCAAGGT CAGCTATTGG GACTATCAGT ACAGCGCCGA TGGCGAAATC
ACCGCCATTG TCGACGCTGT CGACCCGAAC ATGACGCAGT TGATCGGCTA CGACGCGTTG
AGTCGTATGA CCAAGCTGAC CCGCTTCGGT GTCATCAACA ATCTTTCCTA CGATGCCGGC
GGCAATCACG ACCGCTATCA GGCAGGAAAT CAGCTGACCC AATACAGCAT CGACCCGGGG
AGCAACCGGG TGCTGAACTA CACCAACCAG GACGGCAGCC GTCAGTACCA GTACGACGCA
TTGGGAAATC GTATCAGCGA GACCGCAGGC AGCCGGATCA GCACCTACGA ATACGACGCC
TTCAATCGCA TGAGCCGCAG CAACATCGGT GGCACTGCGA CTGACTATGT GCTCAATGCG
CAGGGGCAGC GCGTTGCGAA GGTCAACAAG AACATCAACA GCCGCTACTT CTACGCTGGC
CAGAACCAGC TCATGACCGA GCTGAACAAT GGCGTGTGGA CCAACTATTT CTGGTTCGAA
GGTGAACTGG TGGGTTTGGC TCGCAGCGGG CAGCACAATT ATGTGCATAC CGATCATCTT
GGACGCCCGG AGTTCGTCAC CAGCCCGAGC CAGCAGACCG TCTGGAAGGC GTACAACTAT
GCGTACGGCC GCAGCGTCCA GAAGGATGAG ATCGGAGGGT TGAACATTGG CTTCCCGGGC
CAGTACTACG ATGTGGAAAG CGGACTCTGG TACAACGGCT TCCGCGACTA TGACGCGAGC
ATCGGCCGGT ATGTGCAGAG TGATCCGATC GGGTTGGCAG GGGGACTGAA TACCTACGCG
TACGCCGAAG GAAACCCAGT CACCGGGTTC GATCCATTGG GTCTCTGCAA GACGGATTAT
GTCGGAGCAA TCCTGGGAGC AGCCGATATG GCGGCTGGCG TCGGTGCAAT AACTGCGGGT
AGTGCTGACT CCATCATTGC AGCGGTCGCA GGAAGCGAAG ATGGCGGACT CGTTGGTTTG
ACGGTGGCGG CAATGGGCTT GGCCACCTTC CACGATGGAG CCAACAACCT GGCGACCGCG
TTTGACGGGA AAGAGAGGAC ACCGGCTTTG GAAAAAGTGG GCGGATCACT ATTGGGATGG
CAGGGAGCCC AGATAGGTCG CTACGTGAGT AACTTCAATA CAATCACCAG TCTAAGCAAA
GGAATTCGAA GTGTTCTGAA AGGAACCGCT AAGCTGTCGG ATGCGCACGA AATCGCCAAG
GGCATCAAAG AAAATGGCGG CGGACCTGCA TCTCCTTGTG ACTGTGGTGG GAAATAG
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| Protein sequence | MPALTLALIG LNAVVSVNTY EYDELGRVIV ERGNGVQNVR YAYDAEGRVT QVTDSQNRVT
RMSYDPRGRL IKSIDAVGGT TQIAYDLADR PVRVSDPRNL VTTYEFDGFG QMWKQVSPDT
GTTQHQYDAA GLRTSTTRAD GSVVSFGYDG LGRMTSASAE GRTMGYSYDW CGNGKGQMCG
TSGPGTATHF AYTPNGQLQI RRDFTDLSGQ KTDYSTTYGY DGINRLSQII YPNGDKATYT
YGSQGKPSAL TATVDGTQRS IISQANWKVT GAHEWLAYGN GLARGYNHDQ EGRLTAMSVW
GPNGSKVSYW DYQYSADGEI TAIVDAVDPN MTQLIGYDAL SRMTKLTRFG VINNLSYDAG
GNHDRYQAGN QLTQYSIDPG SNRVLNYTNQ DGSRQYQYDA LGNRISETAG SRISTYEYDA
FNRMSRSNIG GTATDYVLNA QGQRVAKVNK NINSRYFYAG QNQLMTELNN GVWTNYFWFE
GELVGLARSG QHNYVHTDHL GRPEFVTSPS QQTVWKAYNY AYGRSVQKDE IGGLNIGFPG
QYYDVESGLW YNGFRDYDAS IGRYVQSDPI GLAGGLNTYA YAEGNPVTGF DPLGLCKTDY
VGAILGAADM AAGVGAITAG SADSIIAAVA GSEDGGLVGL TVAAMGLATF HDGANNLATA
FDGKERTPAL EKVGGSLLGW QGAQIGRYVS NFNTITSLSK GIRSVLKGTA KLSDAHEIAK
GIKENGGGPA SPCDCGGK
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