Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smal_0010 |
Symbol | |
ID | 6477486 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stenotrophomonas maltophilia R551-3 |
Kingdom | Bacteria |
Replicon accession | NC_011071 |
Strand | + |
Start bp | 12428 |
End bp | 12853 |
Gene Length | 426 bp |
Protein Length | 141 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 642729143 |
Product | Biopolymer transport protein ExbD/TolR |
Protein accession | YP_002026398 |
Protein GI | 194363788 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0848] Biopolymer transport protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.0041719 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGCTTTCA GTAGTGGTAA CAGCGGCGGC CCCATGGCCG ACATCAACGT TACGCCCCTC GTGGACGTGA TGCTGGTGCT GCTGATCATC TTCATCATCA CGGCGCCCCT GATGTCCCAC AAGGTCAAGG TGGATCTGCC GGAGGCCAAC CTGGTCCAGA AGCCGGACGA CACCAACGAT CGCAAGGGTC CCATCACCCT GGCAGTCAAG GAAGATGGCT CGATCTACTG GAACGACGAA GAAATCAACA AGCAGACTCT CGAGTCGCGC TTGGCGACCG CCGCCCAGCA GACCCCGCAG CCGCCGTTGA ACCTGCGTGG TGACCGCACC ACCAAGATGC GCGTCATCAA CGAGATGACC AAGATCGCGC AGGAACAGGG CATGCTGGAC GTCGGCTTCG TTGCGACCAA AGAAAAGGGG CAATAA
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Protein sequence | MAFSSGNSGG PMADINVTPL VDVMLVLLII FIITAPLMSH KVKVDLPEAN LVQKPDDTND RKGPITLAVK EDGSIYWNDE EINKQTLESR LATAAQQTPQ PPLNLRGDRT TKMRVINEMT KIAQEQGMLD VGFVATKEKG Q
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