Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smal_0007 |
Symbol | |
ID | 6477483 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stenotrophomonas maltophilia R551-3 |
Kingdom | Bacteria |
Replicon accession | NC_011071 |
Strand | + |
Start bp | 9511 |
End bp | 10698 |
Gene Length | 1188 bp |
Protein Length | 395 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 642729140 |
Product | TPR repeat-containing protein |
Protein accession | YP_002026395 |
Protein GI | 194363785 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG3071] Uncharacterized enzyme of heme biosynthesis |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.0101354 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATTTTCC GTAACCACAA AGCTGTGCTT TCCGTCCTCG TCGCGACCGC CCTGACCGGC GCCGTGGTCA CCGATGCCTT CGCGCAGTCC TCGCGCTCCT CCGAGCGTGG CAACCGCGGC GGCAAGCAGG CCAAGGCCGA GGCGCTGTAC CCGAACGCGA CCCGCCAGGA GCCGACGGTC AAGGCCTCTG CCAAGATGGG CAGCAAGCTG CAGAAAATGA TCGACAGCTA CAACAAGGAA AAGTTCCCGG AGACCCGTAC CCAGGCCGAC GCGATCCTGG CTGACAGCGC CGCGAACGAG TACGACAAGT CGCTGGCCGC GCAGCTGGCT TCGCAGGCTG CCTACCAGAC CGAGGACACC CCGGCGGCCG TGGCCTACCT GAAGCAGGTC CTGCAGTTCA ACGGCCTGGA CAACAACGGC CACTTCCAGT CGATGCTGAT GCTGGGCCAG CTGGAGCTGC AGGAAGACAA GACCGCCGAA GGCCTGGCGA CCCTGGACAA GTACTTCGCC GAGAGCAAGT CGACCAAGCC GGAAGAACTG ATCGCCAAGG GCCAGGCGCT GTACCAGCTG GAGCGCTACC AGGAAGCGAT CCCGGTGCTG AAGCAGGCCA TCGCCGGCTC CGCCGAACCG AAGGACAACT GGAACCAGCT GCTGATGGCG GCCCTGTCCG AAGCCGGCCA GTCCGGTGAA GCGGTCAAGG AAGCCGAGGC GCTGGCCGCC AAGAACCCCA GCGACAAGAA GGCCCAGCTG AACCTGGCCA GCATGTACAT GCAGGCCGAC CAGATGGACA AGGCTGCCAC GGTGATGGAC AAGCTGCGCA GCAGCGGCCA GCTCACCGAA GAGCGCGAGT ACAAGCAGCT GTACTCGATC TATGCCAATA CCGAGCACAA GGAAAAGGAC GTCATCGCGG TCATCAACGA AGGGTTGCAG AAGGGCATCC TGAAGCCGGA CTACCAGGTC TACCTGGCGC TGGCCCAGTC CTACTACTAC TCCGACCAGG TGCCGCAGGC GATCGATGCG TGGCAGAAGG CCGCCCCGCT TTCCAAGGAC GGTGAGACCT ACCTGAACCT GGCACGCGTC CTGCATGCCG AAGGTCGCGT CCCCGAGGCC AAGCAGGCCG CCCAGCAGGC GCTGGCGAAG GGCGTGAAGA ACCAGGCTGA TGCCAAGAAA ATCATCAACC TGAAGTAA
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Protein sequence | MIFRNHKAVL SVLVATALTG AVVTDAFAQS SRSSERGNRG GKQAKAEALY PNATRQEPTV KASAKMGSKL QKMIDSYNKE KFPETRTQAD AILADSAANE YDKSLAAQLA SQAAYQTEDT PAAVAYLKQV LQFNGLDNNG HFQSMLMLGQ LELQEDKTAE GLATLDKYFA ESKSTKPEEL IAKGQALYQL ERYQEAIPVL KQAIAGSAEP KDNWNQLLMA ALSEAGQSGE AVKEAEALAA KNPSDKKAQL NLASMYMQAD QMDKAATVMD KLRSSGQLTE EREYKQLYSI YANTEHKEKD VIAVINEGLQ KGILKPDYQV YLALAQSYYY SDQVPQAIDA WQKAAPLSKD GETYLNLARV LHAEGRVPEA KQAAQQALAK GVKNQADAKK IINLK
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