Gene Smal_0007 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_0007 
Symbol 
ID6477483 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp9511 
End bp10698 
Gene Length1188 bp 
Protein Length395 aa 
Translation table11 
GC content63% 
IMG OID642729140 
ProductTPR repeat-containing protein 
Protein accessionYP_002026395 
Protein GI194363785 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG3071] Uncharacterized enzyme of heme biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.0101354 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTTTCC GTAACCACAA AGCTGTGCTT TCCGTCCTCG TCGCGACCGC CCTGACCGGC 
GCCGTGGTCA CCGATGCCTT CGCGCAGTCC TCGCGCTCCT CCGAGCGTGG CAACCGCGGC
GGCAAGCAGG CCAAGGCCGA GGCGCTGTAC CCGAACGCGA CCCGCCAGGA GCCGACGGTC
AAGGCCTCTG CCAAGATGGG CAGCAAGCTG CAGAAAATGA TCGACAGCTA CAACAAGGAA
AAGTTCCCGG AGACCCGTAC CCAGGCCGAC GCGATCCTGG CTGACAGCGC CGCGAACGAG
TACGACAAGT CGCTGGCCGC GCAGCTGGCT TCGCAGGCTG CCTACCAGAC CGAGGACACC
CCGGCGGCCG TGGCCTACCT GAAGCAGGTC CTGCAGTTCA ACGGCCTGGA CAACAACGGC
CACTTCCAGT CGATGCTGAT GCTGGGCCAG CTGGAGCTGC AGGAAGACAA GACCGCCGAA
GGCCTGGCGA CCCTGGACAA GTACTTCGCC GAGAGCAAGT CGACCAAGCC GGAAGAACTG
ATCGCCAAGG GCCAGGCGCT GTACCAGCTG GAGCGCTACC AGGAAGCGAT CCCGGTGCTG
AAGCAGGCCA TCGCCGGCTC CGCCGAACCG AAGGACAACT GGAACCAGCT GCTGATGGCG
GCCCTGTCCG AAGCCGGCCA GTCCGGTGAA GCGGTCAAGG AAGCCGAGGC GCTGGCCGCC
AAGAACCCCA GCGACAAGAA GGCCCAGCTG AACCTGGCCA GCATGTACAT GCAGGCCGAC
CAGATGGACA AGGCTGCCAC GGTGATGGAC AAGCTGCGCA GCAGCGGCCA GCTCACCGAA
GAGCGCGAGT ACAAGCAGCT GTACTCGATC TATGCCAATA CCGAGCACAA GGAAAAGGAC
GTCATCGCGG TCATCAACGA AGGGTTGCAG AAGGGCATCC TGAAGCCGGA CTACCAGGTC
TACCTGGCGC TGGCCCAGTC CTACTACTAC TCCGACCAGG TGCCGCAGGC GATCGATGCG
TGGCAGAAGG CCGCCCCGCT TTCCAAGGAC GGTGAGACCT ACCTGAACCT GGCACGCGTC
CTGCATGCCG AAGGTCGCGT CCCCGAGGCC AAGCAGGCCG CCCAGCAGGC GCTGGCGAAG
GGCGTGAAGA ACCAGGCTGA TGCCAAGAAA ATCATCAACC TGAAGTAA
 
Protein sequence
MIFRNHKAVL SVLVATALTG AVVTDAFAQS SRSSERGNRG GKQAKAEALY PNATRQEPTV 
KASAKMGSKL QKMIDSYNKE KFPETRTQAD AILADSAANE YDKSLAAQLA SQAAYQTEDT
PAAVAYLKQV LQFNGLDNNG HFQSMLMLGQ LELQEDKTAE GLATLDKYFA ESKSTKPEEL
IAKGQALYQL ERYQEAIPVL KQAIAGSAEP KDNWNQLLMA ALSEAGQSGE AVKEAEALAA
KNPSDKKAQL NLASMYMQAD QMDKAATVMD KLRSSGQLTE EREYKQLYSI YANTEHKEKD
VIAVINEGLQ KGILKPDYQV YLALAQSYYY SDQVPQAIDA WQKAAPLSKD GETYLNLARV
LHAEGRVPEA KQAAQQALAK GVKNQADAKK IINLK