Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smal_0006 |
Symbol | |
ID | 6477482 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stenotrophomonas maltophilia R551-3 |
Kingdom | Bacteria |
Replicon accession | NC_011071 |
Strand | + |
Start bp | 8572 |
End bp | 9378 |
Gene Length | 807 bp |
Protein Length | 268 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 642729139 |
Product | peptidase M48 Ste24p |
Protein accession | YP_002026394 |
Protein GI | 194363784 |
COG category | [R] General function prediction only |
COG ID | [COG4783] Putative Zn-dependent protease, contains TPR repeats |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.00889597 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAAACACC TGCTGTTGGC CCTTGTCATC ACCACGTTGG TCAGCGCCTG TGCGACCACA ACCTCACCCA CCGGCCGTCG GCAGATGGTC GGTGGCGTGT CGCAGGCGCA GCTGGACCAG CTCGGTGCGC AGGCGTTCGC CGAGACCAAG CAGAAGGAAA AGATCAGCAC CGATGGCCGC CAGAACGGCT ATGTACAGTG CGTGGTCAAC GCCCTGGTCG CGCAGCTCCC GCCTCAATAC CGTGGCGTAC GGTGGGAGAC GGCGGTGTTC GTCGACAAGG AGCCCAACGC ATTCGCCCTG CCCGGGGGCA AGGTCGGTGT GAACACCGGC ATCTTCACCG TGGCCAAGAA CCAGGACCAG TTGGCTGCCG TAATCGGCCA TGAAATCGGC CACGTCATCG CCCGCCATCA CGAAGAACGC ATCACCCGCC AGATGGGCGC ACAGACCGGC CTCGCCGTGC TCGGTGCGCT GGCCGGTGCC GCCTATGGAG AAGGCGCCGC CAGTACCGTC AATCAGCTCG GCGGCATGGG CGCGCAGACC GCTTTCCTGC TGCCGGGTTC GCGCACCCAG GAAAGCGAAG CCGACGTAAT CGGCCAACGG CTGATGGCGC AGGCAGGGTT CAACCCCGCG CAGGCCGTCG ATCTGTGGCA GAACATGATG GCCGCCAGCG GCGGTCGTAG CCCACAATGG CTCTCCACCC ACCCTGATCC GGCCAACCGG ATCCAGGAAC TGCGACGCGA TGCGCCGGGC CTGACCCCGG TCTATCAGCA GGCGCAGGCG GCTGGGCTGC GGCCAAAGTG CGGATGA
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Protein sequence | MKHLLLALVI TTLVSACATT TSPTGRRQMV GGVSQAQLDQ LGAQAFAETK QKEKISTDGR QNGYVQCVVN ALVAQLPPQY RGVRWETAVF VDKEPNAFAL PGGKVGVNTG IFTVAKNQDQ LAAVIGHEIG HVIARHHEER ITRQMGAQTG LAVLGALAGA AYGEGAASTV NQLGGMGAQT AFLLPGSRTQ ESEADVIGQR LMAQAGFNPA QAVDLWQNMM AASGGRSPQW LSTHPDPANR IQELRRDAPG LTPVYQQAQA AGLRPKCG
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