| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Paes_2380 |
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| Symbol | |
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| ID | 6459049 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Prosthecochloris aestuarii DSM 271 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011061 |
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| Strand | - |
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| Start bp | 38085 |
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| End bp | 40442 |
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| Gene Length | 2358 bp |
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| Protein Length | 785 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 642729111 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_002019725 |
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| Protein GI | 194335159 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG5010] Flp pilus assembly protein TadD, contains TPR repeats |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATCAGG AAAAAAAGGA TTTTTTCATC AGCTACACCG GAGCCGACCA GCAGTGGGCC
GAGTGGATCG CCTGGCAGCT TGAAAAGGCT GGATATACAA CTGTGCTGCA AGCCTGGGAT
TTTCATGCAG GTTCCAACTT TGTACAGGAC ATGCAGACGG CATTGGAAAA GGTACAGCGT
ACTATTGCTG TTCTTTCGCC ACGATATCTG CAATCAGCGT ACGCACGGGC TGAATGGTCT
GCTGTTTTTG CTGAAGATCC CACAGGAGAA AAAGGAATAC TCATTCCTGT TCGCATCGAG
CCCTGTGAGC TCAAAGGCCT GCATAAAGCG ATTGTCTATA TCGACCTGGT TCGGAAAGAG
AGAAAAAACG CACAAGCATT TCTGCTTAAG GAACTCCAGC ATGTACTTGA AAAAAGCAGT
CGCAAACCGA AACAGGAACC AGGCTATCCA GGAGAATTCA AGCCAGAACC GAGATACCCT
GGTTCCCTTC CCGATGTCTG GAACATCCCC CGTCGAAACC CGAACTTCAC CGGACGTGAT
CAACTGCTTC AGGATCTTCA TGCTTCACTG ACTGACGGCA ATCATACGGC GCTCACCCAG
CAGGCGCTCC ATGGGTTGGG AGGTATCGGC AAATCACAGC TGGCAATCGA ATACGCGTAT
CGATACAGTA CATCCTATGC TCATGCATGG TGGATACGTG CAGAAGAAGA CGCAAGTATC
ATCACTGATT ATGCCGCTCT GGCAACAGCA TTGCAGTTGC CGGAAAAAGA TGCCGAAGAG
CAGAAGGTCA TCATCGAAGC CGTACGCAGA TGGCTCAATA CGCACCATGG CTGGCTTCTG
GTTTTCGATA ATGTCCGAGA TGCAGCAAGT ATTCGCCACT ATCTGCCGGA CGGCACTGGG
GGGCATGTGC TCATCACCTC CCGCAATCCT GACTGGAGAA CCATCGGCAG GCCGCTGCAG
GTAACGGTCT GGGAACGCGA TGAATCCATC GCGTTTCTGA AACAGCGAAC TGGCCAGGAT
CAGCAAGAAA ACAGCGATGC CAACGAACTG GCTGATGAGC TTGGTGATCT GCCCCTGGCC
CTCGAACAGG CCGCCGCCTT TATCGAGAAA CGGCATATCA CGATAAGCGA GTACCTGAAC
CTCTATCGCA CACGCCGCAA GGATCTTCTG GACAGAACGA CGCCCTCTGA CGATTATCCC
GATACGATCG CTACGACCTG GGTGATGGCG TTCGAGGCCA TCAGGGACGT TCCTTTGGCC
AGTGACCTGC TGTTCTTCAG CAGCATCATT GCACCCGATG CGATCCCCAA AGATCTGATC
AAACAGGCGC TGGAACAGCG TGTTGATGAT CAGGACCATG AAGAGCAATC GATCGATGAA
CTCGATTTTC ACGATGCCAT CGATGCCCTC TGTTCGTATT CACTGATCAG CCCTGACACC
GATACTTTTT CCATCCATCG TCTGGTGCAG GCCATAACCC AGGATAGGAT GGGGCCGGAA
GCAATAGCTC ACTACAGAAA GGAGATGCTC CAGTCCCTTC TGGCCTTGTT TCCCGAAGAT
GCCCACAACA CGCCATCATG CTGGCGGTTA TGCGCAGAAC TGCTCCCTCA TGCGGAAAAG
ATTATTGAAA AAAGTGATCC ATCGGTAAAC ATGGCAACAT TGTTGAACAA CATGGGGAGC
TACTATCATG GGCGCGCCTT CTATGCGGAA GCAGAGCCGC TGTACCGCCG CGCACTGGAT
ATTTACGAAA AGCAGCTGGG AGGAGAACAT CCGTATGTTG CGACGAGCCT GAACAATCTG
GCGGAATTGT TTCGGGCGCA GGGAAAGTAC GGAGAAGCCG AGCCGCTGTA CCGCCGCGCG
CTGGGGATTG ATGAAAAAGC GTTGGGATTG GAACACCCCG AAGTGGCAAC TGATCTGAAC
AATCTGGCGT TATTGCTGGA TGCGCAGGGA AAGTACGGAG AAGCAGAGCC GCTGTACCGC
CGCGCACTGG ATATTTACGA AAAGCAGCTG GGAGGAGAAC ATCCGTATGT TGCGACGAGC
CTGAACAATC TGGCGGGATT GCTGTATGCG CAGGGAAAGT ACGGAGAAGC CGAGCCGCTG
TACCGCCGCG CGCTGTTGAT CAGGGAAGAG CAGCTGGGAG GAGAACATCC GTATGTTGCG
ACGAGCCTGA ACAATCTGGC GGGATTGCTT GATGCGCAGG GAAAGTACGG AGAAGCCGAG
CCGCTGTACC GCCGCGCGCT GGGGATATGT GAGCAGTCAT TAGGAGCATC GCATCCGAAT
ACGATCACGA TGCAGAACAA CCTGGAAGTG CTGCTTGAGA AAATGAAGGA TTCGGGTGAT
AGGGAGAAGA AATCATAG
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| Protein sequence | MDQEKKDFFI SYTGADQQWA EWIAWQLEKA GYTTVLQAWD FHAGSNFVQD MQTALEKVQR
TIAVLSPRYL QSAYARAEWS AVFAEDPTGE KGILIPVRIE PCELKGLHKA IVYIDLVRKE
RKNAQAFLLK ELQHVLEKSS RKPKQEPGYP GEFKPEPRYP GSLPDVWNIP RRNPNFTGRD
QLLQDLHASL TDGNHTALTQ QALHGLGGIG KSQLAIEYAY RYSTSYAHAW WIRAEEDASI
ITDYAALATA LQLPEKDAEE QKVIIEAVRR WLNTHHGWLL VFDNVRDAAS IRHYLPDGTG
GHVLITSRNP DWRTIGRPLQ VTVWERDESI AFLKQRTGQD QQENSDANEL ADELGDLPLA
LEQAAAFIEK RHITISEYLN LYRTRRKDLL DRTTPSDDYP DTIATTWVMA FEAIRDVPLA
SDLLFFSSII APDAIPKDLI KQALEQRVDD QDHEEQSIDE LDFHDAIDAL CSYSLISPDT
DTFSIHRLVQ AITQDRMGPE AIAHYRKEML QSLLALFPED AHNTPSCWRL CAELLPHAEK
IIEKSDPSVN MATLLNNMGS YYHGRAFYAE AEPLYRRALD IYEKQLGGEH PYVATSLNNL
AELFRAQGKY GEAEPLYRRA LGIDEKALGL EHPEVATDLN NLALLLDAQG KYGEAEPLYR
RALDIYEKQL GGEHPYVATS LNNLAGLLYA QGKYGEAEPL YRRALLIREE QLGGEHPYVA
TSLNNLAGLL DAQGKYGEAE PLYRRALGIC EQSLGASHPN TITMQNNLEV LLEKMKDSGD
REKKS
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