Gene Paes_2348 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPaes_2348 
Symbol 
ID6459031 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProsthecochloris aestuarii DSM 271 
KingdomBacteria 
Replicon accessionNC_011061 
Strand
Start bp8672 
End bp8923 
Gene Length252 bp 
Protein Length83 aa 
Translation table11 
GC content57% 
IMG OID642729079 
Producttype IV secretory pathway VirB3 family protein 
Protein accessionYP_002019693 
Protein GI194335127 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG5268] Type IV secretory pathway, TrbD component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones52 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGAAG AGTATTCCGT GCCGGTACAC CGCTCGCTTG CGGAAGTGAT CCTTATCGGC 
GGTCTGCCGA GAACTGTGGC AATACTGCTG TGGACGACAG CCGGGGCAGC AGGTTTCGGC
ATGCAGCAGC TCTGGGTATT GCCGGTGGCC ATCGTGCTCC ATGTCGTCCT TGCCATGACG
GCAAAGCGTG ATCCGCATTT TTTCGATGTC TTTGTGCGGG CGCTGAAATC CCCCAAACGT
CTTGATCCAT AG
 
Protein sequence
MSEEYSVPVH RSLAEVILIG GLPRTVAILL WTTAGAAGFG MQQLWVLPVA IVLHVVLAMT 
AKRDPHFFDV FVRALKSPKR LDP