| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Paes_2342 |
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| Symbol | |
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| ID | 6459021 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Prosthecochloris aestuarii DSM 271 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011061 |
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| Strand | + |
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| Start bp | 1890 |
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| End bp | 2453 |
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| Gene Length | 564 bp |
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| Protein Length | 187 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 642729073 |
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| Product | conjugal transfer protein precursor |
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| Protein accession | YP_002019687 |
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| Protein GI | 194335121 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4959] Type IV secretory pathway, protease TraF |
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| TIGRFAM ID | [TIGR02771] conjugative transfer signal peptidase TraF |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.131603 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAGGGAC TGCATACATT ACGGCCTTTG CTGTTTTCTG CCGGCATGAC GCTGCTTCTG
GTCATGATGG CCGGGTGGTA TCTTCCGGGC CGGGTGATCT TCAACTATAC CGACAGCCTG
CCGCACGGCG TGTATCTCAT CAGGGATATC CGCACCTGTG AACACGGTGA TGTTGTCGTC
TTCCCGGTCC CTCAGCACGT GCGCAAGCTG GTTCAGGACC GGGGGTGGCT GAACGAAGGG
GACATGCTCA TGAAACCCGT GCTTGCACGC TCCGGAGAAG AGTGCTGCAT GAGGGATGGC
CTGCTGGTCA TCAACGGCAG AACGGTCAGC CGTATTTCCG CCACCGATGC AGATGGCAGG
AGCATGCCTG TCACAGAATT CTGCGGAACG GTTCCCGACG GCATGATCAT TGTCGGCACA
GCGATGGAGA ACAGCTTTGA TTCCCGCTAT TTCGGGCCAG TTGCTGTATC ATCCGTCACC
GGAAAGGCTG TTGCGCTCCT GACCTGGGAG AGTGGCCGAC AGGACAGGCA GGGATCACAT
GGTAACGAGC AGGAGGCGTC ATGA
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| Protein sequence | MKGLHTLRPL LFSAGMTLLL VMMAGWYLPG RVIFNYTDSL PHGVYLIRDI RTCEHGDVVV
FPVPQHVRKL VQDRGWLNEG DMLMKPVLAR SGEECCMRDG LLVINGRTVS RISATDADGR
SMPVTEFCGT VPDGMIIVGT AMENSFDSRY FGPVAVSSVT GKAVALLTWE SGRQDRQGSH
GNEQEAS
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