Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ppha_R0008 |
Symbol | |
ID | 6461447 |
Type | rRNA |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelodictyon phaeoclathratiforme BU-1 |
Kingdom | Bacteria |
Replicon accession | NC_011060 |
Strand | + |
Start bp | 115163 |
End bp | 116657 |
Gene Length | 1495 bp |
Protein Length | |
Translation table | |
GC content | 52% |
IMG OID | 642726412 |
Product | 16S ribosomal RNA |
Protein accession | |
Protein GI | |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.00667028 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | AGAGTTTGAT CCTGGCTCAG GACGAACGCT GGCGGCGTGC CTAACACATG CAAGTCAAAG GAAAGCAGCT TCGGCTGGGA GTACTTGGCG CAAGGGTGAG TAACGTATAG GTAATCTGCC CTTTGGACTG GAATAACCCC GAGAAATCGG GGACAATACC AGATGAAGCA GCGACAATCG CATGGTTGTT CTGCCAAAGA TTTATCGCCA AAGGATGAAC CTATATCCCA TCAGGTAGTT GGTAAGGTAA CGGCTTACCA AGCCTACGAC GGGTAGCTGG TCTGAGAGGA TGATCAGCCA CATTGGAACT GAGACACGGT CCAGACTCCT ACGGGAGGCA GCAGTGAGGA ATATTGCGCA ATGGGCGAAA GCCTGACGCA GCAACGCCGC GTGGATGATG AAGTTCTTCG GAATGTAAAG TCCTTTTGTA GAGGAAGAAT ATCCCGGTTT ACCGGGACTG ACGGTACTCT GCGAATAAGC CACGGCTAAC TCTGTGCCAG CAGCCGCGGT GATACAGGGG TGGCAAGCGT TGTCCGGATT TACTGGGTGT AAAGGGTGCG CAGGCGGGCC GATAAGTCGG GGGTTAAATC CATGTGCTTA ACACATGCAT GGCTTCCGAT ACTGTCGGCC TAGAGTCTCG AAGAGGAAGA TGGAATTTCC GGTGTAACGG TGGAATGTGT AGATATCGGA AAGAACACCA GTGGCGAAGG CAGTCTTCTG GTCGAGCACT GACGCTCAGG CACGAAAGCG TGGGGAGCAA ACAGGATTAG ATACCCTGGT AGTCCACGCC GTAAACGATG AATACTAGAT GTTGGTCATA TTGATCAGTG TCGCAGCTAA CGCGTTAAGT ATTCCACCTG GGAAGTACGC CCGCAAGGGT GAAACTCAAA GGAATTGACG GGGGCCCGCA CAAGCGGTGG ATCATGTGGT TTAATTCGAT GCAACGCGAA GAACCTTACC TGGGCTTGAT ATGGCGACTA AACTCATTGA AAGATGAGGT GCTTCGGCGA GTCGTCACAG GTGCTGCATG GCTGTCGTCA GCTCGTGTCG TGAGATGTTG GGTTAAGTCC CGCAACGAGC GCAACCCCTA CAATTAGTTA CTAACAGGTT AAGCTGAGGA CTCTAATTGA ACTGCCTACG CAAGTAGTGA GGAAGGAGGG GATGACGTCA AGTCCTCATG GCCCTTACGC CCAGGGCCAC ACACGTGATA CAATGGTAGC TACAGAGGGC AAAGCCGCGA GGCAGAGTTA ATCCCTTAAA AGCTATCTCA GTCCGGATCG GAGTCTGCAA CTCGACTCCG TGAAGTTGGA ATCGCTAGTA ATCGCAGATC AGCATGCTGC GGTGAATGTG TTCCCGGGCC TTGTACACAC CGCCCGTCAA GTCATGGAAG TCAGGAGTAC CCAAAGACAC TCGCGTGTTT AAGGTAAGAC TGGTAACTGG GACTAAGTCG TAACAAGGTA GCCGTACCGG AAGGTGCGGC TGGATCACCT CCTTT
|
Protein sequence | |
| |