| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_2919 |
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| Symbol | |
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| ID | 6462082 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011060 |
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| Strand | - |
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| Start bp | 3013528 |
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| End bp | 3014442 |
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| Gene Length | 915 bp |
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| Protein Length | 304 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 642729064 |
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| Product | ROK family protein |
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| Protein accession | YP_002019678 |
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| Protein GI | 194337884 |
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| COG category | [G] Carbohydrate transport and metabolism
[K] Transcription |
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| COG ID | [COG1940] Transcriptional regulator/sugar kinase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0770756 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGTTGAAC ACTTTTGGGG TATAGATCTC GGTGGTACCA AAATCGAGGC GGTGGTGATC
AATAATCACC TGAAGCCCGT GATGCGCCGC AGAATCGCCA CAGAGGCCTC AGAAGGTTAC
AACCATATTC TTCAGCGTAT CGAGCAACTG ATCGGGATGA TCGCTCTTGA GTCCGGTATA
ATGCTCCCTT CAACAATCGG TATCGGCACA CCCGGACGCT ATGATGCTGC CTGTGGCGTC
ATGAAAAATT CCAATACCCT CTGCCTGAAC GGCCGCAATC TGAAAGATGA TCTTGAGCAA
CTCCTCAAAA GGGCCGTTGT GCTTGAAAAT GATGCCAACT GTTTTGCACT TGCTGAATCC
CTGCTTGGCT CTGGTGCGGC ACTGATGCGT GAGGATACAA CGGTGGCGTT CGGTATTATT
CTCGGTACTG GCGTTGGAGG CGGGATTGTT TGTGGAGGCA AAGCCCGCCG GGGCGCCCAC
GGCATTGCCG GAGAGTGGGG GCACAATGAA CTGATACCTG GCGGAGAACC CTGCTATTGT
GGTCGGAGGG GCTGCGTCGA AACCGTTATC TCCGGTCCGG CACTTGAGCG CTACTATCAC
CAGTTGAGCG GCAGCTTCAA GCCCCTGGAG CGGATTGCGG CCACCTGCGA TTCCGATGAT
GCCGCCGCAG CAACAATCGA ACGACTGCTC TTCTATTTTG GAAAAGCGCT CGCTACAGTC
ATCAATATTC TTGATCCTGA TCTCTGCATC ATTGGCGGTG GAGTCGGGCA GATAGAGCAG
TTGTATGCAC AAGAGGCCGT TCAGGCAATC GAAAGGCATT TGTTCAACAG CGAACTCCGC
ATTCCCCTGC TCCGTCCGCT TCTCGGCGAC AGCGCCGGAG TTTTTGGAGC GGCATTGTTG
GCACGCAAGC CATAA
|
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| Protein sequence | MVEHFWGIDL GGTKIEAVVI NNHLKPVMRR RIATEASEGY NHILQRIEQL IGMIALESGI
MLPSTIGIGT PGRYDAACGV MKNSNTLCLN GRNLKDDLEQ LLKRAVVLEN DANCFALAES
LLGSGAALMR EDTTVAFGII LGTGVGGGIV CGGKARRGAH GIAGEWGHNE LIPGGEPCYC
GRRGCVETVI SGPALERYYH QLSGSFKPLE RIAATCDSDD AAAATIERLL FYFGKALATV
INILDPDLCI IGGGVGQIEQ LYAQEAVQAI ERHLFNSELR IPLLRPLLGD SAGVFGAALL
ARKP
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