Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ppha_2903 |
Symbol | |
ID | 6461984 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelodictyon phaeoclathratiforme BU-1 |
Kingdom | Bacteria |
Replicon accession | NC_011060 |
Strand | + |
Start bp | 2989859 |
End bp | 2990389 |
Gene Length | 531 bp |
Protein Length | 176 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 642729049 |
Product | hypothetical protein |
Protein accession | YP_002019663 |
Protein GI | 194337869 |
COG category | [R] General function prediction only |
COG ID | [COG3688] Predicted RNA-binding protein containing a PIN domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.544112 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAGAG GAGCAAAAGA GATCCTGATT GATGGCTATA ACCTTATCCA TAAGCTTCAT CCCTCTCTGA CCTCGGCGTC TCTTGATGTT CTGCGCAAGG AAACAGAAAC ACAACTCCTC TGTTTTCAAC AAAAAACAGA GTGTCCGATA ACCGTTGTCT ATGATGGAAA AGGGAGCCCC AGAGAGAGTG CGTGCGGGGC GCCACTGCAT ATCGTCTTTA CTTCAGCCTC AAAAAGTGCT GATCACTGGA TCATTGATTA CGTAAAGTCG TTGAACACAA GAGTAAAAAA GGTTACTATT GTAAGTTCAG ACGATGAGAT TCGACGGTAC GCAACAGCAT TCGGAGCAAC ATGCGTAAAA TCCGAGACAT TTGCACTGCA ACTCAATGAA CTGACAGCAG ATGCTGCCGT TCAGGACAAG AGCCGCCACT CCCTGCGCAT GACGGTCAAA GAAAAAAAAT TCAATGACAA ATTGTTGAGC GAAAGGGAAG TTTCTCGATG GATGAAGCTC TTCGCACGCG AAAAATCGTA G
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Protein sequence | MKRGAKEILI DGYNLIHKLH PSLTSASLDV LRKETETQLL CFQQKTECPI TVVYDGKGSP RESACGAPLH IVFTSASKSA DHWIIDYVKS LNTRVKKVTI VSSDDEIRRY ATAFGATCVK SETFALQLNE LTADAAVQDK SRHSLRMTVK EKKFNDKLLS EREVSRWMKL FAREKS
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