Gene Ppha_2903 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPpha_2903 
Symbol 
ID6461984 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelodictyon phaeoclathratiforme BU-1 
KingdomBacteria 
Replicon accessionNC_011060 
Strand
Start bp2989859 
End bp2990389 
Gene Length531 bp 
Protein Length176 aa 
Translation table11 
GC content45% 
IMG OID642729049 
Producthypothetical protein 
Protein accessionYP_002019663 
Protein GI194337869 
COG category[R] General function prediction only 
COG ID[COG3688] Predicted RNA-binding protein containing a PIN domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.544112 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAGAG GAGCAAAAGA GATCCTGATT GATGGCTATA ACCTTATCCA TAAGCTTCAT 
CCCTCTCTGA CCTCGGCGTC TCTTGATGTT CTGCGCAAGG AAACAGAAAC ACAACTCCTC
TGTTTTCAAC AAAAAACAGA GTGTCCGATA ACCGTTGTCT ATGATGGAAA AGGGAGCCCC
AGAGAGAGTG CGTGCGGGGC GCCACTGCAT ATCGTCTTTA CTTCAGCCTC AAAAAGTGCT
GATCACTGGA TCATTGATTA CGTAAAGTCG TTGAACACAA GAGTAAAAAA GGTTACTATT
GTAAGTTCAG ACGATGAGAT TCGACGGTAC GCAACAGCAT TCGGAGCAAC ATGCGTAAAA
TCCGAGACAT TTGCACTGCA ACTCAATGAA CTGACAGCAG ATGCTGCCGT TCAGGACAAG
AGCCGCCACT CCCTGCGCAT GACGGTCAAA GAAAAAAAAT TCAATGACAA ATTGTTGAGC
GAAAGGGAAG TTTCTCGATG GATGAAGCTC TTCGCACGCG AAAAATCGTA G
 
Protein sequence
MKRGAKEILI DGYNLIHKLH PSLTSASLDV LRKETETQLL CFQQKTECPI TVVYDGKGSP 
RESACGAPLH IVFTSASKSA DHWIIDYVKS LNTRVKKVTI VSSDDEIRRY ATAFGATCVK
SETFALQLNE LTADAAVQDK SRHSLRMTVK EKKFNDKLLS EREVSRWMKL FAREKS