Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ppha_2900 |
Symbol | |
ID | 6461927 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelodictyon phaeoclathratiforme BU-1 |
Kingdom | Bacteria |
Replicon accession | NC_011060 |
Strand | - |
Start bp | 2987758 |
End bp | 2988189 |
Gene Length | 432 bp |
Protein Length | 143 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 642729046 |
Product | hypothetical protein |
Protein accession | YP_002019660 |
Protein GI | 194337866 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.000636857 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGCAAGCGA GTAAGAGGGT GGCACTTTTT TTGCGAGGTC TCCTGCGGGG TGTCAAGGGC TTCGCAAAAA AGAGGCCTGA GGAGGTGGTT GCTGTTGGCA GCGAGGCTCA GGAGGTTCCG AATTCAGGGA TCAAAGAGAT GGTCAGCAAC GCGCTTGAGT TCGATATCGG TTTACTCTTG CGTCCGACCT CGTTTTTGTA CATTCTGGCC GGAATGGGGA TTATTCTTTT CCAGACCTAT AACAACCTTG CGATTAACAA TCTTGCTCTT CATAATGAAA AGCTTCGAGA GCAGATACAG ATGACATCAA GTGTTATAAC CTCACAGGAA CTTAAAATGG GTGAATTGCA TAGTATCCGT AATATTGCTG AAAATGCTGC TGCGCTTGGG GTTGTGGCTT CGAGTATTCC TCCGGTTGAG CTTGTGCCAT GA
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Protein sequence | MQASKRVALF LRGLLRGVKG FAKKRPEEVV AVGSEAQEVP NSGIKEMVSN ALEFDIGLLL RPTSFLYILA GMGIILFQTY NNLAINNLAL HNEKLREQIQ MTSSVITSQE LKMGELHSIR NIAENAAALG VVASSIPPVE LVP
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