| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_2847 |
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| Symbol | |
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| ID | 6461235 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011060 |
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| Strand | - |
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| Start bp | 2935672 |
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| End bp | 2936208 |
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| Gene Length | 537 bp |
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| Protein Length | 178 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 642728995 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_002019610 |
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| Protein GI | 194337816 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3063] Tfp pilus assembly protein PilF |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAACA GGAAACGATT TTTTTTCATA GCAGTTATCG CGTTACTGTC CGGAACTCAT
GTGGCCAGCG CCAGCCCGGC AGATGACGCC AAAAGCTATT TTTCAAGCGC CGAAGCAAAA
TTCGGGAAGG GGGATAATCA GGGAGCCATG GCAGACTACA CAAAAGCCAT TGAACTCGAT
CCGAAACTTG CGGAGGCCTA TAACAGCCGG GCGGCGGTAA AATTCAGCAT GGGCGACAAG
CCAGGCGCCC TGGCGGACTA TACCATGGCC ATGGAACTTA ACCCGAAATA TGCTGATGCT
TGCAATAACA GGGGGAGCAC CAAAGCTGAA ATGGGTGACA AGCAGGGAGC CATTGCCGAT
TACTCCAGGG CTATTGAGAT TGATCCGGCA TTTCTTCCGG CCTACATCAA CCGGGCGGCA
GTCAAACTTG ATCTTGGAGA CAAGCAAGGT GTCATAGCGG ATCTGTCGGC AGCGGCCAAA
CTTGGTAGTT TGGGAGCCCA ACAATGGCTT CACAATAACG GGGTTTCCGG TTGGTAA
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| Protein sequence | MKNRKRFFFI AVIALLSGTH VASASPADDA KSYFSSAEAK FGKGDNQGAM ADYTKAIELD
PKLAEAYNSR AAVKFSMGDK PGALADYTMA MELNPKYADA CNNRGSTKAE MGDKQGAIAD
YSRAIEIDPA FLPAYINRAA VKLDLGDKQG VIADLSAAAK LGSLGAQQWL HNNGVSGW
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