Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ppha_2841 |
Symbol | |
ID | 6461162 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelodictyon phaeoclathratiforme BU-1 |
Kingdom | Bacteria |
Replicon accession | NC_011060 |
Strand | - |
Start bp | 2926629 |
End bp | 2928356 |
Gene Length | 1728 bp |
Protein Length | 575 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 642728989 |
Product | N-acetylmuramoyl-L-alanine amidase |
Protein accession | YP_002019604 |
Protein GI | 194337810 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0860] N-acetylmuramoyl-L-alanine amidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCCCACT TTTTACTTTG TATTCGTTCT CGTCTGGCCG CTCTTGTGCT GATTGCCCTG CTGATGTTCT CATACAGAAG CCTTTTTGCA GAGTCACCTT CACTTTCCGG ACAGACGGCT CTTCCGCTTG TTGTGACCAC AGGAAACGAT CAGGGCTATA CCATTAAGGT GATGGCTTTG AGAACAGCAA AGACGTTGTT GATTGATCTT GAATCTATGG CAAGGGGTTT GCGACTGAAC TATCGAAAGG AGCCGGGCGG ACTTGTTGTC GAGGAATCTT TCGGGATGCC CGGTACCATT TGTACGATCA TGACAAATAA TAATTTTGTC CGCATTGTTT CAAGGGATCC GGAGATTCCG GCAAGAATTA TTCAGATGCA GTCGGCCCCC TCACTACAGC AATCAAGAAT CTGGATGCCA GTCAGTCAGG CTTGTCGGCT TTTTGCCGTT TGGCTGGACA GGGAGGTCGT TTATAACCAG TCGATGGGTC AGATCCATGT TGCGCTTCTG AAAAAAAATT TCGGAGAATC GAGAGAAACC ATCGGGATTG TCAGTAACGA AGAGTCTTTT GCTGGTGCAA ATTCCACGAA ACAGGCTGAA CTCTCCAAAA CGGTGATTAC CGGTATTGAG GTGAAAAACC GTGATAATGG GGCGATCATA AGTTTTTCTG CTTCCGGCCT TGCTGCACAA GCATCGCTTG TCACGCTCAA TGCTGAAGGG TATACCTATT TCTCCCTTGA AAAAGCATCC GGTGACAGCA ACGCCCTCTC ACAAGTGTAT GGTAAAGGTG TGGTCAAAGA AATTATTTCA AAGCAGTTGC CCGGGTCGGG GTTACAATTT ACTGTTGTAC TTGATAATCG TTCATTTGTC ATCAGTTCGG TCGAATTTCA ACGCGATAAA AAAAATAACC GTTATCTGCT CTATGTCCGC AGCAAGGCTG ATGGAGAGGA GATTCGCAGA AAGGAAAAGG AGCAGCAGAT TGCACAGGTT CTCAGCCGCG ATATTGAAAA GTGGAAGCTT GATACCATTG TGCTCGACGC AGGTCATGGA GGCAAGGATC CCGGAGCAAT AGGCGCAAAC GGTACGGTTG AGAAACATGT TGCACTCAAT ATTGTACGAG ATCTCGGTAC CTTTATCAGA CTGAATTGGC CTGATGTGAA GGTGGTGTAT ACGAGAAAAG AGGACAAATT TATTCCTTTG CATGAACGAG GAAAAATTGC AAACCAGAAC GGGGGAAAAC TATTTATCAG CGTGCACTGC AATGCAAGTT CAAGCCGCAG CGCCCGCGGT TCTGAAGTCT ATATTCTCGG AGCCCATAAA ACCAGGGCAA GCCTTGATGT TGCCATGCTG GAGAACTCGG TTATCCGTCA GGAAGCCGAC TATACCCAGG CCTACAAGGG TTTTTCCGAG GAGTATCTCA TCATGAGCAG TATGGCGCAG AGCGCTTTTG CCCGGCAGTC TACATCCCTC GCACAGCATA TCCTTAACCC CGGTCATCGC CTGGCGCCCG ATAAAAGAAA CGGAGTGCGC CAGGCTGGTT TTATGGTGTT ATGGACCCCT TCCATGCCGA GCGCTCTTGT CGAAGTGGGG TACCTTTCCA ATCCCGGAGA GGAGCGAATT CTGCGGGATC GTCAGGAGCA GACGAAAATT GCCTATGCCA TTTTCCAGGG CCTGCAGGCC TATCGTAAAA ATTATGAAAC ATCGAGTATG GCCTCAATGG GTCGCTGA
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Protein sequence | MPHFLLCIRS RLAALVLIAL LMFSYRSLFA ESPSLSGQTA LPLVVTTGND QGYTIKVMAL RTAKTLLIDL ESMARGLRLN YRKEPGGLVV EESFGMPGTI CTIMTNNNFV RIVSRDPEIP ARIIQMQSAP SLQQSRIWMP VSQACRLFAV WLDREVVYNQ SMGQIHVALL KKNFGESRET IGIVSNEESF AGANSTKQAE LSKTVITGIE VKNRDNGAII SFSASGLAAQ ASLVTLNAEG YTYFSLEKAS GDSNALSQVY GKGVVKEIIS KQLPGSGLQF TVVLDNRSFV ISSVEFQRDK KNNRYLLYVR SKADGEEIRR KEKEQQIAQV LSRDIEKWKL DTIVLDAGHG GKDPGAIGAN GTVEKHVALN IVRDLGTFIR LNWPDVKVVY TRKEDKFIPL HERGKIANQN GGKLFISVHC NASSSRSARG SEVYILGAHK TRASLDVAML ENSVIRQEAD YTQAYKGFSE EYLIMSSMAQ SAFARQSTSL AQHILNPGHR LAPDKRNGVR QAGFMVLWTP SMPSALVEVG YLSNPGEERI LRDRQEQTKI AYAIFQGLQA YRKNYETSSM ASMGR
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