| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_2836 |
|---|
| Symbol | |
|---|
| ID | 6461058 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011060 |
|---|
| Strand | - |
|---|
| Start bp | 2921847 |
|---|
| End bp | 2922629 |
|---|
| Gene Length | 783 bp |
|---|
| Protein Length | 260 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 642728984 |
|---|
| Product | biotin biosynthesis protein BioC |
|---|
| Protein accession | YP_002019599 |
|---|
| Protein GI | 194337805 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG4106] Trans-aconitate methyltransferase |
|---|
| TIGRFAM ID | [TIGR02072] biotin biosynthesis protein BioC |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTATCCGT TAATCGACAA AGAACTGGTT CGTGAACGAT TTTGCCGCAC CCTTGGCAGC
TATGGCAGCA ATGCCGTCGT ACAGAAAGCA ATGGCCGGAG AGCTTGCTGA ACTTATCTGC
AAGCAGGAGC CGGGCTTTTC GTTTGAGCGG GTGCTTGAGG TCGGGGCTGG TTCAGGGGCC
CTCATGGCAG AACTGCTGCA TCGCCGCTCC GTAAAGGCCT ATTATGCCAA TGATCTTGTT
GAAGAGAGCC GTATCTCTCT CCAGGGGGTT CTTGACCGTT TTCCTGTTGG GGAGTTTCAC
TTTCTTGCCG GCGATATCGA GACACTGGAG CTGTTGCCTT TTTCGCTCGA CCTTGTTGCC
TCCAATGCTA CCCTGCAATG GCTTGATGAC CTTGACCGAT TTTTCGGAAA AATCTCCGAT
CATCTCAGGC CGGGAGGGAT GCTCGCATTC AGCACCTTCG GCCCTTCGAA CATGCGTGAA
ATAGCAAGCA TCGAGGGTGT CGGTCTCAGC TATCACACCC TCCGGGAGCT TGAACTTCTT
GCCAGCCGCT ATTTTGATCT GGTTGTCAGC CGCGAAGAGA AGATCCCGAT GGAGTTCAGT
TCACCGGAGG CGATGCTCCA CCATATACGC AAGACCGGGG TCAACGGGCT CCTTCGCCGT
TCCTGGACAA AAAGTCGCTA CCTCCATTTT ATTGAAGAGT ATCGGCGACG CTTTTCTTCT
GAAAACGGTG TCAGCCTGAC CTATCACCCA CTCTATTGCT GTCTGAAAAA AAGAGCCTCA
TGA
|
|---|
| Protein sequence | MYPLIDKELV RERFCRTLGS YGSNAVVQKA MAGELAELIC KQEPGFSFER VLEVGAGSGA
LMAELLHRRS VKAYYANDLV EESRISLQGV LDRFPVGEFH FLAGDIETLE LLPFSLDLVA
SNATLQWLDD LDRFFGKISD HLRPGGMLAF STFGPSNMRE IASIEGVGLS YHTLRELELL
ASRYFDLVVS REEKIPMEFS SPEAMLHHIR KTGVNGLLRR SWTKSRYLHF IEEYRRRFSS
ENGVSLTYHP LYCCLKKRAS
|
|---|
| |