Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ppha_2828 |
Symbol | |
ID | 6460958 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelodictyon phaeoclathratiforme BU-1 |
Kingdom | Bacteria |
Replicon accession | NC_011060 |
Strand | - |
Start bp | 2913711 |
End bp | 2915168 |
Gene Length | 1458 bp |
Protein Length | 485 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 642728978 |
Product | ATPase (AAA+ superfamily)-like protein |
Protein accession | YP_002019593 |
Protein GI | 194337799 |
COG category | [R] General function prediction only |
COG ID | [COG1373] Predicted ATPase (AAA+ superfamily) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.925455 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCGTTTC AATCTTTTGC TGAAGAACAG GTCACTGACC GCATTCGTTT TGAAAATCCC TGGTGGCATA GCGGTAAGGT CGAAGAGTAT TACGGAAACA TGACACCCCG TCTCTATCTT GATCTCTTTG AGCCGCTGGT GGCAAACGTA TTGGTAAGAA GAGCGGTCAT ACTCATGGGG CCAAGACGGG TAGGCAAAAC GGTCATGCTC TATCATACCA TCCAGCATTT GCTTATGGAG GGGCACAATC CGCAAAAGGT TGCGTTTCTC TCCATTGATA CCCCCATTTA CAACAATATC CCGCTGGAGC AGCTTTTTCG GTTATGCACA AAAACAACCG GTCAAATTGA TGCCAAGGGA TGGTTTGTCT TTTTTGATGA AATACAATAC CTGAAAGATT GGGAAGTTCA TTTGAAATCG CTGGTTGACA GCTATCCTGA AACCCGTTTT GTGGTTTCCG GTTCAGCAGC AGCAGCTCTG AAACTGAAAA GCAGGGAGAG CGGAGCCGGG CGGTTTACCG AGTTTCTGCT CCCCCCGCTG ACCTTCAACG AGTACATTCA CCTGCTCAAT CTCAATGCGC TGATTCGACC ATCAACCTTT ACATGGGATG GCGGGATAAC TGATTTTTAT GATGCTGTTG ACATCAGAAA GCTGAACGAG CATTTCCTCA ACTATATCAA TTTCGGCGGA TACCCTGAAG TTATTTTTTC TGAAGCGGTA CAGTCCGATC CTGGACGATA TATCCGCTCT GATATCATCG ACAAGGTCTT GTTGCGCGAT CTGCCAGGGT TGTACGGCAT CAAGGATGTT GCGGAGCTGA ACTCACTCTT TACGGCCATA GCCTACAATT CCGGTCAGGA ATTTTCTCTC GAATCACTCA GTACCTCTTC AGGGGGCGTT GACAAGAACA CGCTTAAACG ATACATCGAA TATCTGGAAG CCGCGTTTCT TGTCAGAACA GTCAAACGCA CCGATAATAA CGTCAAGCAC TTCAGGCGGT CAACACAGTT TAAAATGTAT TTGACCAACC CCTCGCTTCG CAGCGCACTC TTTTCGCCGC TTCATGCCAC CGATGACCAC ATCGGCGCAA TGGTTGAAAC CGCAGTTTTT TCACAGTGGA TGCATCGCGA CTGGATAGAG CCCTGGTATG CCCGGTGGAG CAAAGGAGAG GTTGACTTGA TTTGCCTGGA TGAAAAAAAG TTCAAGCCCC TCTGGGCGGT CGAAATCAAG TGGAGCAACC GCTACTTTGA GTATCCTGCG GAACTCAAAT CACTCATCTC CTTTTGTACC ACAAACCAGC TCCAGAAGGC GGTGGTAACG ACAATTGACA AGCAGGGAGT AAAGGAGGAG AGTGGCGTGC AGCTTACCTT TGTTCCCGCA TCGGTTTACG CGTATGCGGT TGGCCGAAAC ACACTGATTC AGAAAAAACA GCAACTGTAC ATTATCTCAA ATTCTTGA
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Protein sequence | MAFQSFAEEQ VTDRIRFENP WWHSGKVEEY YGNMTPRLYL DLFEPLVANV LVRRAVILMG PRRVGKTVML YHTIQHLLME GHNPQKVAFL SIDTPIYNNI PLEQLFRLCT KTTGQIDAKG WFVFFDEIQY LKDWEVHLKS LVDSYPETRF VVSGSAAAAL KLKSRESGAG RFTEFLLPPL TFNEYIHLLN LNALIRPSTF TWDGGITDFY DAVDIRKLNE HFLNYINFGG YPEVIFSEAV QSDPGRYIRS DIIDKVLLRD LPGLYGIKDV AELNSLFTAI AYNSGQEFSL ESLSTSSGGV DKNTLKRYIE YLEAAFLVRT VKRTDNNVKH FRRSTQFKMY LTNPSLRSAL FSPLHATDDH IGAMVETAVF SQWMHRDWIE PWYARWSKGE VDLICLDEKK FKPLWAVEIK WSNRYFEYPA ELKSLISFCT TNQLQKAVVT TIDKQGVKEE SGVQLTFVPA SVYAYAVGRN TLIQKKQQLY IISNS
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