| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_2806 |
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| Symbol | pyrE |
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| ID | 6461644 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011060 |
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| Strand | + |
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| Start bp | 2894326 |
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| End bp | 2894892 |
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| Gene Length | 567 bp |
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| Protein Length | 188 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 642728957 |
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| Product | orotate phosphoribosyltransferase |
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| Protein accession | YP_002019572 |
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| Protein GI | 194337778 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0461] Orotate phosphoribosyltransferase |
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| TIGRFAM ID | [TIGR00336] orotate phosphoribosyltransferase
[TIGR01367] orotate phosphoribosyltransferase, Thermus family |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCTTGACG TTTTCAAGAC AACCGGCGCC CTGCTTGATG GCCACTTCAG GTTGACCTCC
GGCCGCCACA GCAATGCCTA CTTTCAGTGC GCAAAGGTTC TGCAACATCC GGAACACCTG
ACGGCAGTAT GCAGCAAAAT TGCAGAACAT TTCACCGGCA AGGGAGTCGA AACGGTCATC
TCTCCTGCAA TCGGCGGCAT TGTGGTTGGC ACGGAGGTGG GACGACAGCT CGGTGTCAAA
ACGATCTTTG CTGAACGCAA GGAGGGGGTT ATGTCCATCC GCCGGGGCTT CACGCTGGAA
CCCGGTGAAC GGGTACTGGT TATCGAGGAT GTCATCACCA CCGGCGGCTC GGTTGCCGAG
GTGATTGAAC TGATCAAGAG CGCTGGCGCA TCACTTGTCG GGGTTGGCTC GGTGGTTGAC
CGCAGCAACG GACGTGTTAA GCTTGCTGAC GACCATTTTT CAGTCCTTTC GATGGAGGTG
ATCAGCTATA CTCCCGAAGA GTGCCCTCTC TGCAAGGAGG GTGTACCAAT CGACGCTCCC
GGAAGCAGGG CAAACAAGCA AAACTAA
|
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| Protein sequence | MLDVFKTTGA LLDGHFRLTS GRHSNAYFQC AKVLQHPEHL TAVCSKIAEH FTGKGVETVI
SPAIGGIVVG TEVGRQLGVK TIFAERKEGV MSIRRGFTLE PGERVLVIED VITTGGSVAE
VIELIKSAGA SLVGVGSVVD RSNGRVKLAD DHFSVLSMEV ISYTPEECPL CKEGVPIDAP
GSRANKQN
|
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