| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_2798 |
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| Symbol | |
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| ID | 6461420 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011060 |
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| Strand | - |
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| Start bp | 2889143 |
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| End bp | 2889409 |
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| Gene Length | 267 bp |
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| Protein Length | 88 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 642728949 |
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| Product | regulatory protein, FmdB family |
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| Protein accession | YP_002019564 |
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| Protein GI | 194337770 |
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| COG category | [S] Function unknown |
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| COG ID | [COG2331] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR02605] putative regulatory protein, FmdB family |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.821801 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCCAACCT ATCAGTATCG TTGCAGCAAC TGTGGAAATG AGCTTGAAAT AGTACAGAAA
ATAAGCGATG CATCCCTGAC GCTCTGCCCG AAATGTGAAA CAGAGAGCTT CGAGAGGGTC
ATCAGCGCCA GCGGTGGATT TTTGCTGAAA GGCTCCGGTT TTTATAAAAC AGACTACGGC
AGTGGCAAAC CCGCGCCAGC AGCGCCAACG CCAAGTCCAT GCTCAACCGG AGCCTGCTCG
GGCGGAGGCT GTCCTCTGGC CAAATAG
|
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| Protein sequence | MPTYQYRCSN CGNELEIVQK ISDASLTLCP KCETESFERV ISASGGFLLK GSGFYKTDYG
SGKPAPAAPT PSPCSTGACS GGGCPLAK
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