| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_2787 |
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| Symbol | |
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| ID | 6462622 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011060 |
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| Strand | - |
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| Start bp | 2880761 |
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| End bp | 2881579 |
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| Gene Length | 819 bp |
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| Protein Length | 272 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 642728940 |
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| Product | DNA/RNA non-specific endonuclease |
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| Protein accession | YP_002019555 |
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| Protein GI | 194337761 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG1864] DNA/RNA endonuclease G, NUC1 |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.148277 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGGTGC TCAGGTCGGC AATCTCTTTT CGGAATCGAA TATCGTTTTT TGTGCTCTTC
CTGCTGTTTG TGGCAGCAGG GAATGCGAGT ACGCTGTATG CTTCTTCCAC ACCCTGGCCA
TTGCAATATC TGAGCGGTGT TGCTCCGGAT ATCAAGAATA CAAAACTGGC GCAGAAAACT
CGTGAACTGG GTTTTGATAA CTATGTTGTC ATGCATTCGG GTGTGACCAT GAGCCCGTTA
TGGTCTGCTG AGTATTTGAC ACGCGAGAAC TTGCTGAGTG CGAAGGGATT GGAGAGGCGG
AACAGTTTTC ACCATGAAGA GCAGCTTCCT GTCAGTGAAC GGGCAGAACT GAAGGATTAC
GCAAAATCAG GATTGGATCG TGGCCACATG GCGCCAAATG CTGACATGCC GACAGAGAAG
GCACAGTGGC AATGCTTTTC ACTTGCGAAT ATGATTCCCC AGGATCCGGA CAATAACCGT
AATTTATGGG CCGCCATCGA ATCTTCCGTG AGGACAATGG TCAGAAACCG TGGCGATCTC
TATGTAATTT CCGGGCCACT CTATCTTGGT ACCACTCTAA AACGTCTGAA CGGCCGGGTT
TTTGTGCCGA CGAACATGTT TAAAATTGTT TATGATCCTC GTTTGAAAAG GGGGGCGGCT
TACGTTGTCA GCAATGAGCC GGGTGAAGAG TGGCAGGTTT TGAGTATCAG TCAGATTGAG
AAATTGGCAG GGATCAATTT TTTCCCGAAA CTATCATTTG CTGATAAACA ATCGATGTTG
AAATTGCCTG ACCCGACACG GCATAATGAT CGTTATTGA
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| Protein sequence | MMVLRSAISF RNRISFFVLF LLFVAAGNAS TLYASSTPWP LQYLSGVAPD IKNTKLAQKT
RELGFDNYVV MHSGVTMSPL WSAEYLTREN LLSAKGLERR NSFHHEEQLP VSERAELKDY
AKSGLDRGHM APNADMPTEK AQWQCFSLAN MIPQDPDNNR NLWAAIESSV RTMVRNRGDL
YVISGPLYLG TTLKRLNGRV FVPTNMFKIV YDPRLKRGAA YVVSNEPGEE WQVLSISQIE
KLAGINFFPK LSFADKQSML KLPDPTRHND RY
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