| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_2783 |
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| Symbol | |
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| ID | 6461903 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011060 |
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| Strand | - |
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| Start bp | 2876249 |
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| End bp | 2878261 |
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| Gene Length | 2013 bp |
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| Protein Length | 670 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 642728936 |
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| Product | alpha amylase catalytic region |
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| Protein accession | YP_002019551 |
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| Protein GI | 194337757 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0366] Glycosidases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATAATG CATTCCAACG GGCGCGTCCC TCTTACAGCA ATCAACCCTG TGACGGTCGT
CAGAGAGTTG TTATAGAAAA TGTTTCACCT GAAATCGACG GGGGCAAGTA TCCGGCGAAA
GTTGTGGAGG GTGATCGGCT TTTTGTTGAG GCAGATATCT TTGTTGATGG TGCAGATACC
ATCACGGCAG AGATCTGCTT CCGACCCCCA GGCAGTGCGG GGTGGACGTT ATCTCCTATG
GAGCCGCAAG GTAACGATCG ATGGAAAGGT TCCTTTCTTG CAGGAACTCC TGGCTATTAC
CAGTATAGCG TTCTGGCTAA AGTTGATCAC TTCCAGACAT GGAAAAAGGG ATTGGCGAAA
AAAATTGAGG CTGGTCAGGA TGTGTCGCTC GACCTGCAGA TCGGCGCTCT TCTGGTGGAG
AAGGGAGCTG AACGGGCTGA AGCGGTCGAT GCCGCCATGC TCAGGTTTAT TGCATCCTGC
CTCCGTTCAG AAGATAAGGA GGAGGCAGCC ATAGCGGCGC TTGATGCAGA ACTTGCCCGG
CTCATGGAGC GTCATCCCGA CAAGGCGTAT GCCTCTTTCT ATGATAACAT ACTCGGCTTG
ACCGTGGAGC AGAAAAAGGC TGGATGCAGT GCGTGGTATG AGCTTTTTCC CCGTTCATGG
GGTTCAGAGC CAGGCCGGCA CGGTACATTC AATGACTGTT GTCGGCAATT GCCGATGATA
GCCGGAATGG GATTCGATGT TATCTATCTT CCTCCTGTTC ATCCGATAGG CTACACGAAG
CGGAAGGGCA AGAATAATGC CCTTGTTGCC GCACCCCATG AGCCGGGCAG TTGCTGGGCA
ATTGGCAATA AGGATGGAGG CCACAAGGCC GTTCATCCGG AACTTGGTAC GCTTGAAGAA
TTTACAGCAT TTGTGACGGA GGCTGAGAAG CTCGGCATTT CTGTGGCGCT TGATATTGCT
TTTCAATGTT CGCCTGATCA TCCTTACGTC AAAGAGCATC CGCAGTGGTT TACCTGGCGT
CCGGACGGGA CAGTGCAGTT CGCCGAAAAT CCTCCCAAAC GATATGAGGA TATCCTTCCC
ATCAATTTTG AGTCTGCTGA CTGGCAGAAC CTCTGGATTG AGCTGAAAAG CATCTTTCTT
TTCTGGATCG ACAAGGGTGT CAAAATTTTT CGTGTTGACA ATCCCCATAC CAAGGCCTTT
CCTTTCTGGG AGTGGGTAAT TTCCTCAATC AGGGAGGAGC ATCCTGATAC CGTTTTTCTG
GCAGAGGCCT TTACCCGCCC AAAACTGATG GCTCGGCTGG CTAAAATTGG CTATAGTCAG
TCATACAGTT ACTTTACCTG GCGTAACACA AAACAGGAGC TGCAGGCATA TGTGAGTGAA
CTGACCTCAG CGCCACTGAA ACATTTCATG CGGGCGAATT TCTGGCCGAA CACGCCCGAT
ATCCTGCACG AAGAGTTCCA GCGAGGCGGA CGGGAGAAGT TTATTATCCG CCTGGTTTTG
GCCTCAACAC TTTCGTCAAA CTATGGCATG TATGGCCCGG CTTATGAACT CTGCGAAAAT
CGGCCGGTTG GCGAAGGCAA GGAGGAGTAT CTTGATTCCG AAAAATATGA GATCAAAGCG
TGGGATCTCG ATCGCCCGGG CAATATCCGC GCCGAGATTA CCCGCATCAA CCGGATACGG
AAAGAGAATC CTGCCCTTCA GCAGACTTCT GACATTACCT TTGTTCATGT TGAAGATTCT
CCGGGTCATG AACATGAACA GTTGATGGCC TATGTGAAGC GGTCGGCGGA TGGCAGCAAT
ATTGTTCTTG TGGTGGTCAA TCTTGATCAG TCCGGTACGC AGTCAGGGTG GCTCAGGTTC
CCTCTCGAAC TTTTCGGACT TTCGCATCAG CACCCCTTCA TGGTTGAGGA TCTGCTCAAC
GGTAATCAAT ACAACTGGAA TGGCGAATGG AACTTCGTGG AGATGAATCC ATGGATCATG
CCAGCGCACA TTTTCAGGGT GACCCTTTCC TGA
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| Protein sequence | MNNAFQRARP SYSNQPCDGR QRVVIENVSP EIDGGKYPAK VVEGDRLFVE ADIFVDGADT
ITAEICFRPP GSAGWTLSPM EPQGNDRWKG SFLAGTPGYY QYSVLAKVDH FQTWKKGLAK
KIEAGQDVSL DLQIGALLVE KGAERAEAVD AAMLRFIASC LRSEDKEEAA IAALDAELAR
LMERHPDKAY ASFYDNILGL TVEQKKAGCS AWYELFPRSW GSEPGRHGTF NDCCRQLPMI
AGMGFDVIYL PPVHPIGYTK RKGKNNALVA APHEPGSCWA IGNKDGGHKA VHPELGTLEE
FTAFVTEAEK LGISVALDIA FQCSPDHPYV KEHPQWFTWR PDGTVQFAEN PPKRYEDILP
INFESADWQN LWIELKSIFL FWIDKGVKIF RVDNPHTKAF PFWEWVISSI REEHPDTVFL
AEAFTRPKLM ARLAKIGYSQ SYSYFTWRNT KQELQAYVSE LTSAPLKHFM RANFWPNTPD
ILHEEFQRGG REKFIIRLVL ASTLSSNYGM YGPAYELCEN RPVGEGKEEY LDSEKYEIKA
WDLDRPGNIR AEITRINRIR KENPALQQTS DITFVHVEDS PGHEHEQLMA YVKRSADGSN
IVLVVVNLDQ SGTQSGWLRF PLELFGLSHQ HPFMVEDLLN GNQYNWNGEW NFVEMNPWIM
PAHIFRVTLS
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