| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_2764 |
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| Symbol | |
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| ID | 6461079 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011060 |
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| Strand | + |
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| Start bp | 2851840 |
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| End bp | 2855667 |
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| Gene Length | 3828 bp |
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| Protein Length | 1275 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 642728918 |
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| Product | multi-sensor hybrid histidine kinase |
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| Protein accession | YP_002019533 |
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| Protein GI | 194337739 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains
[COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.0647988 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAACACA CCATGGAAAA AGAGAGACCA GAATTGGACA TCGATCGGGA GCAACTGCGA
AGAGAGAATG CCGAACTCAG AAAAAAGCTT CACGACCTTG AAGAGAGAGC CACCTCCCTT
GACACATCAA ACCGCACACT CCAGATGGTG GTGGAAGGGA CAAAAGCTGG ATACTGGGAC
TGGAATATCA AAACAGGAGA GCTCGAAATC AATGCGGAGT GGGCCTCTCT GATTGGCTAC
AGCCTCGATG AGCTGCAACC GATATCGATC AACACCTGGA TGCGACTCTG TCATCCGGAT
GATCAGCCTC TTTCCCGGCA ACGACTTGAA GAACATTTTT CCGGAAAAAC AACGGTTTAT
GAAATAGAGC TCCGGATGCG TCATAAACTT GGACACTGGG TCTGGATACT TGACCGGGGA
ATGGTCTTCG AACGTGACAC AGATGGTAAT CCTCTGCGCA TGGTTGGCTC CCATCAGGAT
ATCAGTACAC GAAAAAATAT TGAACAGGCA CTTTCACACG CCCAGACTTT CGAGCGTATC
GTAACAGACC TCTCCAATCA GTTCATCAAC CTGCCCTTCG AGCATATTGA TGCGATGATC
TATAACACGC TGCAGCTTAT CGGTAACTTT GTCGAAGCCG ACCGAAGCTA TGTTTTCCAG
TTCCGTGATG ATCTTCGCTT GATGGACAAC ACCCATGAAT GGTGTGCCTA TGAGGTTAAG
CCACAACTCG AATCACTTAA AGGAATTGAA ACCATTGGCT TCCCCTGGTG GATGGAGCAG
ATCAGGAACA ACCGGATCAT TCATCTTCCC CGGATCGCTG ATATGGAAGT GGAGGCGTCA
GCCGAAAAAA AGATCTTTGA GGCCCAACAG ATCAAGTCGC TGATTGTCAT TCCTCTTGTC
GCAGGGTCAT ACCCTTTCGG CTATATTGGT TTTGATGCCG TAAAAGAGGA ACGGGAATGG
ATGCCGGAAA CCATTTCCAT CCTGAAGCTT GCTGGCGGAA TCATTGCAAA TGCACTGCAA
CGCAAGCAAG TTGAGCACTT TATCCAGGCA GAACTTGATC TTGCCATTAA ACTCAATCAA
TCATCGTCTG TCCACGAAAC CCTCCGAACC TGCCTCCATG CTGCTATTCA AGCTTCCGGG
CTGGATTGCG GAGGCATTTA CCTGGTCAAC AAACTTGACG AAACCATCAC TCTTTCCATT
CATGAAGGAT TGCCGCAATC ATTTATCAAT AATTCAGCAT CATACAGCTT CGAATCCCAG
AATGCCCAGT TGATCCTGAA GGGAAAACCG ATATACCACA AGTTCTATGA TCTTGACCTT
GCAAAAAAGA AAATACACCG GAACGAACAA CTGAAGGCTA TCGCCATCCT CCCGATCACC
TACCGGGGAG AGGTTCTTGC CTGCCTCAAT GTCGCTTCCC ACACTCTGAC ACAGGTCCCT
GAATTTTCCC GGAAAGGGCT TGAAACCATT ACCGCACATA TCGGTTCAGC CATCATGCAG
GCTCGACAGG AGGAGGCAAT TGCTGAAGCA AAAAGCAACC TTGAGTCACT CTTTGATACC
ATTGATGATC TCCTCTTCAT TATCAACACG GAGGGCAATG TTATTCATAC CAATGCCGCT
GTCCGAAAAA AACTTGGCTA CTCAGCAGAA ACCATCCTCG ACAAACATGT GCTTCATTTT
CACCCCGAAG AGCAGTGGGA GATCGTAAAA CGCAATATTG AAGGAATGCT TGCTGGTGAC
AAGAGCTCCT GTCTTGTCCC CTTACAGACA AAATCGGGAA CACTGTTACC CGTCGAAACC
AAAATCACAA AAGGCATCTG GAACAACAAA CCCGTTCTGT TTGGAATAAG CCGCGACTTT
TCTGAGCGGA TACTCTCCGA AAAGAGCTTG CGAGAGAGTG AAAAGCGATT CAGGGAGCTG
ACCGAACTTC TTCCCCTTAC GCTCTTTGAA ACGGATATAA GAGGCGCGGT AACCTATGCC
AATGCCAAAA GCCTCGAGGT TTTCGGCTAC ACCCCCGATA TCACCCAAAA AAGAGTGTTC
GCCATCAATT TTTGTGTTCC GCAGGATGCG AAAAAAGCAT TGCTCCATTT GGACGCAATA
AAAAAAGGGC AGAGTATTTC CGAAGAATAT ACCGCACTCC GACAAGATGG CAGCACCTTT
CCGGCACAGG TCTACAGTTT ACCAATCATT CATAACGGTC TGGTCAAGGG CATTCGGGGA
CTGGTCGTCG ACCTTACCGA ACTGAAAAAA GCGGAACAAG CCCTGAGAAC CAGTGAGGTT
CAAAAAAGGA TCGTCCAGGA ATTCAAGGCC CTCATCGACA ATATTCCCGG GGCTGTCTAT
CAAACCAATG AAGAGAGCAA AACGACAATG CTCTCGATGA TGGGTGATAT TCTGCTGGAT
TATACCAAAG AGGAGTTTGA ACATGAACTG TTTGAAACCG GCAGAATAAT CCATCCTGAA
GAGCGGGATA CGGTCTCGAC ATCAAACCTC CAACTCAGGT TGGCCAAAAC ATCTCAGGCC
CTTTTTTACC GTATTCTCAT GAAAAACGGT TCAGTCAAGT GGCTCGAAGA CCGAAAAACG
TCCGTTTTTT CACCCGACGG CACATTCACA GGAATTGACG GCATTTTGTT TGATGTCACG
GAACGTGTCA CAGCACAAAA GGAGCACCAG ATGCTCGAAG CAAATCTCCG CAGAACCCAG
CGTCTTGAAA CCATAGGAAC ACTCGCCGGC GGTATTGCGC ATGATTTCAA TAATATCCTG
ACACCGATCC TCGGCTATGC CGAAATGGGC ATACTCAGCC CGAGTAATGA TGATTTCCAG
CAGGAATACT TCAGTGAAAT TATTAAGGCT GCAGAACGTG CCAAAAATCT TGTAGCACAA
ATCCTGACAT TCAGCATGGC CCAGGAAAGC ACTCCGAATA TTGTCAGCGT TCAGGAAATT
ATTGATGAAG CATTGAAACT TCTCCGTCCA TCAATACCCT CAACAATCAC CATCGAAAAA
GAGGTTGATA ACTCCTGCCG CAATATCCTT GCCGATCCCT CGCAAATCCA TCAGGTCATT
GTCAATCTCT GCATCAATGC ATTTCAGGCA ATGGAAAAAT CAGGCGGTTT GCTCACCATT
AAACTCGAAG AGGTCACTCC CGAAACCAGC CTGCAAAAAC TGCTCCCGAA ACTTCAAGCG
GAAAACTATG TAAGGCTCAG CATTTCCGAT ACAGGAACAG GGATGGATGA AAGCACCCTG
GAACGAATAT TCGAACCCTT CTTTACCACA AAAACGGTTA ACAAAGGGAC TGGTCTCGGA
CTTTCCGTTG TCCATGGCAT CATCACAAGC TTTAAAGGGG AGATTACTGT TGAAAGCTGT
GCAGAAAAAG GAACCACCTT CAATATTTAT CTTCCTGTCA TCAATGAAGA AGCCCCTCCA
CTACCCATTG CTGATTGCTG TACAAAAGGA TATGGCCACA TTCTTTTTGT TGATGACGAG
CCGACAGTAC TCAAGATGAT GACCATGATG ATCGCGAAAC TTGGATTCAA AATACAATCA
GTGAGCTCGC CCCTGCAAGC GATTGAACTG TTTCGGAAGA ACCCGGAACA ATTCGACCTC
TTGATCACCG ACCTGACCAT GCCAGAGATG ACAGGCGTTG AACTTGCCGA TGAACTGCAC
CTGAAAAACC CGAAACTGCC GGTGATACTG ATGACCGGGT ATGAAAAAGA TATTGAGCAC
ACCTCTCATC TCAACCATCA CGGGATTTGC AAATTCCTCA AAAAGCCGGT CAAGCTCATA
GAGTTAGCCT CAACAATCAA TGACGTAATT TTTGGAACAA ACACTTAA
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| Protein sequence | MQHTMEKERP ELDIDREQLR RENAELRKKL HDLEERATSL DTSNRTLQMV VEGTKAGYWD
WNIKTGELEI NAEWASLIGY SLDELQPISI NTWMRLCHPD DQPLSRQRLE EHFSGKTTVY
EIELRMRHKL GHWVWILDRG MVFERDTDGN PLRMVGSHQD ISTRKNIEQA LSHAQTFERI
VTDLSNQFIN LPFEHIDAMI YNTLQLIGNF VEADRSYVFQ FRDDLRLMDN THEWCAYEVK
PQLESLKGIE TIGFPWWMEQ IRNNRIIHLP RIADMEVEAS AEKKIFEAQQ IKSLIVIPLV
AGSYPFGYIG FDAVKEEREW MPETISILKL AGGIIANALQ RKQVEHFIQA ELDLAIKLNQ
SSSVHETLRT CLHAAIQASG LDCGGIYLVN KLDETITLSI HEGLPQSFIN NSASYSFESQ
NAQLILKGKP IYHKFYDLDL AKKKIHRNEQ LKAIAILPIT YRGEVLACLN VASHTLTQVP
EFSRKGLETI TAHIGSAIMQ ARQEEAIAEA KSNLESLFDT IDDLLFIINT EGNVIHTNAA
VRKKLGYSAE TILDKHVLHF HPEEQWEIVK RNIEGMLAGD KSSCLVPLQT KSGTLLPVET
KITKGIWNNK PVLFGISRDF SERILSEKSL RESEKRFREL TELLPLTLFE TDIRGAVTYA
NAKSLEVFGY TPDITQKRVF AINFCVPQDA KKALLHLDAI KKGQSISEEY TALRQDGSTF
PAQVYSLPII HNGLVKGIRG LVVDLTELKK AEQALRTSEV QKRIVQEFKA LIDNIPGAVY
QTNEESKTTM LSMMGDILLD YTKEEFEHEL FETGRIIHPE ERDTVSTSNL QLRLAKTSQA
LFYRILMKNG SVKWLEDRKT SVFSPDGTFT GIDGILFDVT ERVTAQKEHQ MLEANLRRTQ
RLETIGTLAG GIAHDFNNIL TPILGYAEMG ILSPSNDDFQ QEYFSEIIKA AERAKNLVAQ
ILTFSMAQES TPNIVSVQEI IDEALKLLRP SIPSTITIEK EVDNSCRNIL ADPSQIHQVI
VNLCINAFQA MEKSGGLLTI KLEEVTPETS LQKLLPKLQA ENYVRLSISD TGTGMDESTL
ERIFEPFFTT KTVNKGTGLG LSVVHGIITS FKGEITVESC AEKGTTFNIY LPVINEEAPP
LPIADCCTKG YGHILFVDDE PTVLKMMTMM IAKLGFKIQS VSSPLQAIEL FRKNPEQFDL
LITDLTMPEM TGVELADELH LKNPKLPVIL MTGYEKDIEH TSHLNHHGIC KFLKKPVKLI
ELASTINDVI FGTNT
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