Gene Ppha_2761 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPpha_2761 
Symbol 
ID6461428 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelodictyon phaeoclathratiforme BU-1 
KingdomBacteria 
Replicon accessionNC_011060 
Strand
Start bp2847944 
End bp2848906 
Gene Length963 bp 
Protein Length320 aa 
Translation table11 
GC content46% 
IMG OID642728915 
ProductNucleotidyl transferase 
Protein accessionYP_002019530 
Protein GI194337736 
COG category[J] Translation, ribosomal structure and biogenesis
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1208] Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAGCCT TCGTTCTGGC CGCAGGACTC GGTACTCGCC TGAGTCCCCT GACCGATCAT 
ACCCCGAAAC CACTAATCCC CATTCTCAAT ATTCCCAGCC TTTTTTATTC TGTTTATCTC
CTGAAACAGG CGGGAATCAG AGAGATTATT TGCAATATCC ACCATCATGG CGATACTGTC
AGGCAGTTTA TTGAATCAAG CAATTTGACT GGACTGAACA TCACGTTTTC AGAAGAGCCA
ATCATTCTCG GGACAGGGGG CGGCCTGAAA AAATGTGAAA AGCTCCTTGA TGATGGTGAT
TTTATTCTGG TCAACAGCGA TATTATTTCT GATATTGATT TCAGTGCACT CATCAAACAG
CATCAGGTAA TGGGACGTGC AGGCACCCTT ACCCTGTTTG AGACACCGGA AGCCATTGCG
ATAGGATATG TGGGTGTTGA AGGAGGGCTT GTTAAAGACT TCAGGAACCT GCGTAAAACA
GCTCTTCTCT CCTCGTTCAT CTACACTGGA GTTGCAATTC TCAGTCCAGC AATTTTTCGC
TATCTGAAAG CGGAATTTTC AGGGATTGTC GATACAGGGT TTACAGGACT TATTGATAAC
GGAGGATTAA GCTATTACCA GCACAAGGGT CTCTGGATGG ATATTGGAAC CATGCATAGC
TACTGGCTCG CAAATATTAA CCGAAACTTG ATCATGAACA ATCTGGCTCT GCCAATGAAG
CAGACAATTG GCATCGCTCC ACATGCGATC GCTCCGGATG CGATCATCAG CCCGGAAGCC
AGCATCTCAT GCTCAATTGT CGGCAAGGGA TGCTCCATCG GCGCAGGGTG CACCATTACA
AATTCGGTAC TCCTGCCAGG AGTAGCCATC AAACCCGGAA AGACCATTAT CAATACCATT
GCTGACCCTT ACAGCAGCAT AATCATGGAA AATCCAACAC AAACCAGAAA AAAAAGATGG
TAG
 
Protein sequence
MKAFVLAAGL GTRLSPLTDH TPKPLIPILN IPSLFYSVYL LKQAGIREII CNIHHHGDTV 
RQFIESSNLT GLNITFSEEP IILGTGGGLK KCEKLLDDGD FILVNSDIIS DIDFSALIKQ
HQVMGRAGTL TLFETPEAIA IGYVGVEGGL VKDFRNLRKT ALLSSFIYTG VAILSPAIFR
YLKAEFSGIV DTGFTGLIDN GGLSYYQHKG LWMDIGTMHS YWLANINRNL IMNNLALPMK
QTIGIAPHAI APDAIISPEA SISCSIVGKG CSIGAGCTIT NSVLLPGVAI KPGKTIINTI
ADPYSSIIME NPTQTRKKRW