| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_2757 |
|---|
| Symbol | |
|---|
| ID | 6462109 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011060 |
|---|
| Strand | + |
|---|
| Start bp | 2843768 |
|---|
| End bp | 2845156 |
|---|
| Gene Length | 1389 bp |
|---|
| Protein Length | 462 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 642728911 |
|---|
| Product | Radical SAM domain protein |
|---|
| Protein accession | YP_002019526 |
|---|
| Protein GI | 194337732 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1032] Fe-S oxidoreductase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCAAAC CTGAACATCA ACACATTAAG GCACTCAAGT TTCTTCTCAT AGCCCCGAAA
GGGAAAAAAG ATTCTAAATC AAACCAGAAG CCATTATTCA ATATGGCGAT AGGGGTACTT
GTAAGTATTA CGCCTCCGCA ACACAATATT GAAATTGTTG ATGAGCATTT TGGCGATCCG
ATCAATTATG ACGGTGATTA CGATTTTGTC GGCATAACAT CACGAACCAT TGATGCAACA
AGAGGCTATG AAATTGCCGA TACGTTTCGA AAAAAAGGAA CAAAAGTTAT CCTTGGCGGC
CTGCATGTTT CGTTCAATAT AGAAGAGGCA AAAGTCCATG CCGACACCCT CGTCTGCGGC
GAAGCCGAAA ATCTCTGGCT GACTCTCCTT GAAGATATTG CACTCAACCG CTTAAAACCT
CTCTACGATT CCAAAGACTT TGCACCGGTA AAAGAGGTAC TGGCGCTTGA CTATGAAAAA
ATTGCCAAAG CATCAAAACG TGAAAAAGTA GACGGTACAA AATCTATCCC GATTTATGTT
ACCCGCGGCT GTCCCTATGA GTGTTCATTC TGCGTCACCC CTAATTTTAC CGGAAAGCTT
TACCGGATGC AGAAACCCGA CGAGCTTAAA AAACAGTTTG AAACTGCCAA AAAAGTTTTT
TTTAACGCAA ACGGGAAATC ATCGAAACCA TGGTTCATGC TTTGTGATGA AAACCTGGGC
GTCAGCAAAA AAAAGCTCTG GGAATCTCTC GACCTCATTA AAGAGTGTAA TATCAACTTC
AGCGTTTTCT TCAGCCTCCC CCTCCTTGAA GACAAGGAAA CGGTAAAAAA GCTTGTAGAA
GCAGGGTGCA TCATGGTGCT GGTTGGATTC GAATCCATCA AACAGAGTAC CCTTGAAGCC
TATAATAAAG GTCACGTCAA TTCAGCGGAG AAATATTCCC GTCTGATTGA AGAGTGCCGC
CAGGCAGGCC TGAATGTCCA GGGAAATTTC CTGATTAATC CGGAGCTCGA CAGTTTCGAA
AACATGGATG ACCTTGTTCG GTTTGTCGGT AAAAACAATG TTTTCATGCC GATTTTCCAG
ATTATTACTC CCTACCCAGG CACAACAATG TACTGGGAGT ACAAGAAAAA TGGATGGATA
ACTGATGAAA ATTGGGAGAA ATACAATGCG ATGAATCTTG TCATCCGCTC TGATAGATAC
GACCCCATAA AGTTCCAGCA CAAATTCATG ACAAGCTATT ACAAGGTCTA TTCGTTGAAA
AACATTGCCA ACCGAGTGAG GCGAAACCCC TACAAACTGT TAAACCTTGT CACCAGTCTG
GCTTTTAGAA AAAACATCCG TGAGCAACTC GATACATTCG AAAAGGAACA TAACATCAGA
AGCAAATAA
|
|---|
| Protein sequence | MSKPEHQHIK ALKFLLIAPK GKKDSKSNQK PLFNMAIGVL VSITPPQHNI EIVDEHFGDP
INYDGDYDFV GITSRTIDAT RGYEIADTFR KKGTKVILGG LHVSFNIEEA KVHADTLVCG
EAENLWLTLL EDIALNRLKP LYDSKDFAPV KEVLALDYEK IAKASKREKV DGTKSIPIYV
TRGCPYECSF CVTPNFTGKL YRMQKPDELK KQFETAKKVF FNANGKSSKP WFMLCDENLG
VSKKKLWESL DLIKECNINF SVFFSLPLLE DKETVKKLVE AGCIMVLVGF ESIKQSTLEA
YNKGHVNSAE KYSRLIEECR QAGLNVQGNF LINPELDSFE NMDDLVRFVG KNNVFMPIFQ
IITPYPGTTM YWEYKKNGWI TDENWEKYNA MNLVIRSDRY DPIKFQHKFM TSYYKVYSLK
NIANRVRRNP YKLLNLVTSL AFRKNIREQL DTFEKEHNIR SK
|
|---|
| |