| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_2752 |
|---|
| Symbol | |
|---|
| ID | 6462467 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011060 |
|---|
| Strand | + |
|---|
| Start bp | 2839117 |
|---|
| End bp | 2840136 |
|---|
| Gene Length | 1020 bp |
|---|
| Protein Length | 339 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 642728906 |
|---|
| Product | C-20 methyltransferase BchU |
|---|
| Protein accession | YP_002019521 |
|---|
| Protein GI | 194337727 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR02716] C-20 methyltransferase BchU |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGTCA ACGAGTTACT GAAGCAAAAT CACAGAGCCA CTGAACTTAT TTTTAAAGGT
CTTGTGGAAA GTGGCTGCTT GAAAGCAGCT CTTGAACTTG ACCTTTTTAC TCACCTTGCT
AACGAAGCAA AAGAGATCGA AACATTGGCA GCCAATGTTG GCGCGATTCC GCAAAGACTC
ATCATGTTGC TCGAGACCCT GCGGCAAATG GGGATTACTG CCGAAGAGAA TGGAAAGTGG
AGCCTCACCC CGTTTACGAT TAATATGTTT CTGCCAAACA ATGAGCTTCC GAACCTTTAT
ATGATTCCAG TGGCGAAGGC CATGGCTAGC CTTTCGGAAA ATTTTTACAT GAAAATAGCA
GATGCCGTCA AAGGTAACCT GAATTTCAAG GCCGAGGTCG CCTATCCTCC TGTTACGCGA
GAAGACAACT GGTATTTTGA AGAAATTCAC CGTAGCAACG CCCATTTTGC CATCATGCTT
CTGCTTGAAG AGGCTGACCT GTCGGCTGCA AAAACCCTCG TAGATGTCGG TGGTGGAATC
GGTGATATCT CTGCCGCCCT TTTAAAAAAG TTTCCTCAGC TTGATTCCAC CATTCTGAAT
CTTCCCGGTG CGGTTGAACT GGTAAATGAA AATGCTATCG AAAAAGGAGT TGGAGCTCGT
TTGAGAGGCG TAGCCGTAGA TATATACAAG GACGTATACC CTAAAGCGGA TGCCGTCATG
TTCTGCAGAA TCCTTTATTC AGCAAATGAG CAATTAACCA AAATGCTCTG CCAAAAAGCC
TATGACGCTC TTCCATCAGG CGGGAAAGTG CTCATCCTCG ACATGATTAT CGATGATCAG
GAAAACCCGA ACTTTGACTA TCTGAGCCAC TATGTCCTTG GTGCAGGTAT GCCGTTTTCG
GTACTCGGCT TCAAGGAGCA GAGCGCCTAC AAGGAAATTC TTGAATCAAT CGGCTTCAGC
AATGTTCGCA CAGTCAGGAA GTACGGCCAC TTGTTGTGTG AGGCGGTAAA AGCGGTTTGA
|
|---|
| Protein sequence | MSVNELLKQN HRATELIFKG LVESGCLKAA LELDLFTHLA NEAKEIETLA ANVGAIPQRL
IMLLETLRQM GITAEENGKW SLTPFTINMF LPNNELPNLY MIPVAKAMAS LSENFYMKIA
DAVKGNLNFK AEVAYPPVTR EDNWYFEEIH RSNAHFAIML LLEEADLSAA KTLVDVGGGI
GDISAALLKK FPQLDSTILN LPGAVELVNE NAIEKGVGAR LRGVAVDIYK DVYPKADAVM
FCRILYSANE QLTKMLCQKA YDALPSGGKV LILDMIIDDQ ENPNFDYLSH YVLGAGMPFS
VLGFKEQSAY KEILESIGFS NVRTVRKYGH LLCEAVKAV
|
|---|
| |