| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppha_2714 |
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| Symbol | hemE |
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| ID | 6462633 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelodictyon phaeoclathratiforme BU-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011060 |
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| Strand | - |
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| Start bp | 2805783 |
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| End bp | 2806838 |
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| Gene Length | 1056 bp |
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| Protein Length | 351 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 642728874 |
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| Product | uroporphyrinogen decarboxylase |
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| Protein accession | YP_002019489 |
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| Protein GI | 194337695 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0407] Uroporphyrinogen-III decarboxylase |
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| TIGRFAM ID | [TIGR01464] uroporphyrinogen decarboxylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTCAAAA ATGATCTTTT TCTCCGGGCA CTAAAACGCC AGCCATGTTC CAGAACCCCC
ATCTGGGTGA TGCGTCAGGC AGGTCGTTAT TTGCCGGAGT ACCGTGCTGT GAGAGAAAAA
ACCGATTTTT TAACCCTCTG TAAAACTCCG GAACTGGCAA CCGAGGTTAC CATTCAGCCT
GTTGAACTGA TGGGTGTGGA TGCGGCTATT ATTTTTTCTG ATATTCTTGT GGTTAATGAA
GCCATGGGCA TGAATGTCGA AATTATCGAG TCCAAAGGGA TCAAACTCAC ACCGCCGATC
CGTTCACAGG CCGATATCGA CAAGCTGATT GTTCCTGATA TCGATGAAAA GCTTGGCTAT
GTGCTTGATG CACTTCGCAT GACCAAGAGA GAACTCGACA ACCGTGTTCC CCTCATCGGC
TTTACCGGCG CGGCATGGAC GCTCTTTACC TATGCAGTTG AAGGCGGTGG ATCGAAAAAC
TATGCCTATG CCAAAAAGAT GATGTACCGT GAGCCGGCAA TGGCCCATGC GCTGCTTGGC
AAGATTTCCG GTGTTATCAC GGCCTACGTG CTCAAGCAGA TCGAAGCTGG CGCCGATGCC
ATCCAGATAT TCGACTCATG GGCAAGCGCA CTCTCCGAGG ACGACTATCG TGAATACGCC
CTTCCCTACA TCAAGGATAC CGTTCAGGCC ATCAAGGCAA AATATCCTGA CACTCCGGTC
ATCGTCTTCT CAAAGGATTG CAACACCATT CTTTCTGATA TCGCTGATAC CGGTTGTGAG
GCCATGGGTC TCGGCTGGGG TATTGATATC GGCAAGGCAC GCGCTGAACT TGGCGACCGT
GTAGCTCTGC AGGGTAACCT TGATCCAACG GTACTCTACG GTACACCCGA CAGAATCAAA
GCTGAAGCCT CCAAAATTTT GAAGTCTTTT GGCCAGCATA CCGAACATTC AGGCCACGTT
TTCAACCTCG GTCATGGCAT TCTGCCCGAT ATGGATCCGG AAAATCTGAA ACTGCTTGTT
GAGTTTGTCA AGGAAGAGAG CGCACAGTAC CACTAA
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| Protein sequence | MLKNDLFLRA LKRQPCSRTP IWVMRQAGRY LPEYRAVREK TDFLTLCKTP ELATEVTIQP
VELMGVDAAI IFSDILVVNE AMGMNVEIIE SKGIKLTPPI RSQADIDKLI VPDIDEKLGY
VLDALRMTKR ELDNRVPLIG FTGAAWTLFT YAVEGGGSKN YAYAKKMMYR EPAMAHALLG
KISGVITAYV LKQIEAGADA IQIFDSWASA LSEDDYREYA LPYIKDTVQA IKAKYPDTPV
IVFSKDCNTI LSDIADTGCE AMGLGWGIDI GKARAELGDR VALQGNLDPT VLYGTPDRIK
AEASKILKSF GQHTEHSGHV FNLGHGILPD MDPENLKLLV EFVKEESAQY H
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