Gene Ppha_2710 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPpha_2710 
Symbol 
ID6462616 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelodictyon phaeoclathratiforme BU-1 
KingdomBacteria 
Replicon accessionNC_011060 
Strand- 
Start bp2803451 
End bp2804086 
Gene Length636 bp 
Protein Length211 aa 
Translation table11 
GC content54% 
IMG OID642728870 
Productphosphoheptose isomerase 
Protein accessionYP_002019485 
Protein GI194337691 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0279] Phosphoheptose isomerase 
TIGRFAM ID[TIGR00441] phosphoheptose isomerase 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.555636 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCAAGG GATGTGGCTG TTCTGACGGG CTCACCGACC GTACCCGTTA TGAGGAGGTT 
GTTCTCGATA CCATGCTTTA CAGCGCACAG CTCAAGGAGA GGGTTGCGCG GCAAAACAGC 
GCAGTGATTG TTGCCATGGC ACGTATGATT GCCGGTACTT TTGAGGATGG CGGAAAGGTG 
CTGCTTTGTG GTAATGGCGG CAGTGCGGCG GATGCACAGC ATCTGGCAAC CGAGCTGACT 
ATCCGCTATC GTAGCAGTGT GGAACGACCG GCGCTTCCGG CCATAGCGCT CTCCACCGAT 
ACTTCGGCCC TGACGGCTGG TGCCAATGAT CTCGGTTATG ATGCGGTTTT TGCCCGTCTT 
GTGGAGGCTT ATGGTAGGGA AGGGGATATT TTGCTTGGCC TTTCAACCAG CGGGAACAGC 
CAGAGTGTTA TCAATGCGCT GGATTTTGCA CGGCAGCAGG GGATGAAGAC ACTTGCCTTG 
CTTGGGGGGA ATGGCGGCTT GATGAAGGGG CTGGCGGATC TTGAGCTTAT TGTACCTCAT 
TCAGGTTCTG CTGATCGGGT ACAGGAGTGC CATATTACGA TTGGTCATGT TCTTATTGAT 
CTTGTGGAGC GTATGCTCGG CTATTGCCGT TTATAG
 
Protein sequence
MIKGCGCSDG LTDRTRYEEV VLDTMLYSAQ LKERVARQNS AVIVAMARMI AGTFEDGGKV 
LLCGNGGSAA DAQHLATELT IRYRSSVERP ALPAIALSTD TSALTAGAND LGYDAVFARL 
VEAYGREGDI LLGLSTSGNS QSVINALDFA RQQGMKTLAL LGGNGGLMKG LADLELIVPH 
SGSADRVQEC HITIGHVLID LVERMLGYCR L