Gene Ppha_2709 details

Gene Information

• Locus tag: Ppha_2709
• Symbol: ribH
• ID: 6462618
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pelodictyon phaeoclathratiforme BU-1
• Kingdom: Bacteria
• Replicon accession: NC_011060
• Strand: -
• Start bp: 2802959
• End bp: 2803426
• Gene Length: 468 bp
• Protein Length: 155 aa
• Translation table: 11
• GC content: 50%
• IMG OID: 642728869
• Product: 6,7-dimethyl-8-ribityllumazine synthase
• Protein accession: YP_002019484
• Protein GI: 194337690
• COG category: [H] Coenzyme transport and metabolism
• COG ID: [COG0054] Riboflavin synthase beta-chain
• TIGRFAM ID: [TIGR00114] 6,7-dimethyl-8-ribityllumazine synthase

Plasmid Coverage information

• Num covering plasmid clones: 11
• Plasmid unclonability p-value: 0.117282
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCAGGTGA AACAGATTGA GGGTGTATTA AACGCAAAGG ATATCCGCTT TGCGCTTGTT 
GTCGGACGCT TTAATGATTT TATTGGGCAG AAGCTTGTCG AAGGTGCAAT TGATTGTATC 
TGCCGCCATG GCGGGTCGGA GGAGTGTATT GCAATGTACC GTTGTCCTGG TGCCTTTGAG 
CTGCCGATGG TTGCCAAAAA GGTAGCCCTC AGTGGCAAGT ATGATGCGAT TATTACTCTC 
GGAGTCATTA TCAGGGGTTC CACTCCCCAT TTTGATGTTC TTGCTGCCGA GGCCACCAAG 
GGGATTGCCC AGGTTGCCCT TGACACCATG GTTCCGATAG CGTTTGGCGT TTTGACCACG 
GAAAACATTG AACAGGCGAT AGAGCGGGCA GGAACCAAAG CGGGCAACAA GGGTTTTGAT 
GCTGCCATGA CGGCTATTGA GATGGTGAAT CTTTACCGCC AGATTTAG 

 

Protein sequence

MQVKQIEGVL NAKDIRFALV VGRFNDFIGQ KLVEGAIDCI CRHGGSEECI AMYRCPGAFE 
LPMVAKKVAL SGKYDAIITL GVIIRGSTPH FDVLAAEATK GIAQVALDTM VPIAFGVLTT 
ENIEQAIERA GTKAGNKGFD AAMTAIEMVN LYRQI