Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ppha_2629 |
Symbol | |
ID | 6461675 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelodictyon phaeoclathratiforme BU-1 |
Kingdom | Bacteria |
Replicon accession | NC_011060 |
Strand | + |
Start bp | 2719844 |
End bp | 2720923 |
Gene Length | 1080 bp |
Protein Length | 359 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 642728785 |
Product | helix-turn-helix domain protein |
Protein accession | YP_002019406 |
Protein GI | 194337612 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG2856] Predicted Zn peptidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.0000486694 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATTGAAC ACCGTATACG ACAGGCTCGT CAGGCGGCAG GGCTGACATT GGCTGCATTG GGAGCGAAAA TTGGGGTCAC CCACACCGCT ATCCAAAAGT ATGAGAAGGG CATCATTACC CCGTCATCGT CGATATTGTT GAAACTTGCT CAGGCCTGCG GAGTACGCAC TGAATATTTT TTCCGTTCGC ATACCGTTGA ATTGGTCAAT CCTGAGTTCC GCAAGTTATC AACCTTTGGA AAAACAGCAC AAGAAGAGCT GACCATCAAA GTCATTGATC TGGTTGAAAA GCGGGTAGAA CTTCTTGGTT CATTTCCAGA CTCCCCTATC CCTGCATTCG AGCTTCCTGC TGGCCTTCCG GAACACATAG AAAACCTTGA CCAGATCGAA GCGATTGCTG ACCAGGTACG CAACGCATGG ATGCTCGGCA TGGATCCGAT ACCGGATGTA TGCGACACAT TTGAAGCTTG CGGGCTTCTG GTCATCGTTG TCAACAATAT TCATCCTGGA TTTTCAGGTT TAAAAGCTAC AGCCCGAACA AATGATGGCC GAACCTATCC CATTATTGTG GTGTCAGCAC GCTGGCCGGG AGATCGGCAA CGTTTTACAC TGGCGCATGA ATTGGCTCAT CTCTTGCTCT CAGGTCGTCT TGCTGATAAC CTTGATGAGG AAAAAGCCTG CAACCGTTTT GCCGGAGCTT TCCTTGCTCC TGCCGTTGCC GTAACCCGCC TGCTTGGTCA GCACCGTGAC GCCTTGGAAT GGAAAGAGAT CTACACCCTC AAGCACGAAT TCGGGCTCTC TATGGCTGGG TGGCTTATGC GTGCAAAACA ATGCGATGTT ATAACTGAAG CGCTTTACCG TTCAATGACG ATACGGTTTT CAGCAAAAGG ATGGCGCAAA CTTGAACCGG AAGAGCCCGT ACCACAGGAA AACCCGAAAC TCTTTGAACA ACTGGTCTAC CGTGCACTCG GTGAACACTG CATCCCGGAA TCCAAAGCCG CCGAATTGCT TGGTATCCCG ATGATGTCGT TTTACAAACA ACGCCAACTC GAAACAGCGG ATGATGCTCC TCATCAGTGA
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Protein sequence | MIEHRIRQAR QAAGLTLAAL GAKIGVTHTA IQKYEKGIIT PSSSILLKLA QACGVRTEYF FRSHTVELVN PEFRKLSTFG KTAQEELTIK VIDLVEKRVE LLGSFPDSPI PAFELPAGLP EHIENLDQIE AIADQVRNAW MLGMDPIPDV CDTFEACGLL VIVVNNIHPG FSGLKATART NDGRTYPIIV VSARWPGDRQ RFTLAHELAH LLLSGRLADN LDEEKACNRF AGAFLAPAVA VTRLLGQHRD ALEWKEIYTL KHEFGLSMAG WLMRAKQCDV ITEALYRSMT IRFSAKGWRK LEPEEPVPQE NPKLFEQLVY RALGEHCIPE SKAAELLGIP MMSFYKQRQL ETADDAPHQ
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